Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 ACE3P-201ENST00000423435 1973 ntBASIC14.91□□□□□ -0.02
YBX1P67809 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.91□□□□□ -0.02
YBX1P67809 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.9□□□□□ -0.02
YBX1P67809 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
YBX1P67809 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 MROH4P-201ENST00000431302 1578 ntBASIC14.9□□□□□ -0.02
YBX1P67809 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
YBX1P67809 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.9□□□□□ -0.02
YBX1P67809 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.9□□□□□ -0.02
YBX1P67809 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
YBX1P67809 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
YBX1P67809 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
YBX1P67809 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 AC041040.2-201ENST00000622926 2899 ntBASIC14.9□□□□□ -0.02
YBX1P67809 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
YBX1P67809 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
YBX1P67809 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
YBX1P67809 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.9□□□□□ -0.02
YBX1P67809 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.9□□□□□ -0.02
YBX1P67809 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.9□□□□□ -0.02
YBX1P67809 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.9□□□□□ -0.02
YBX1P67809 RN7SL692P-201ENST00000464677 288 ntBASIC14.9□□□□□ -0.02
YBX1P67809 AC026410.3-201ENST00000514280 936 ntBASIC14.9□□□□□ -0.02
YBX1P67809 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.9□□□□□ -0.02
YBX1P67809 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
YBX1P67809 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.9□□□□□ -0.02
YBX1P67809 AL596325.1-201ENST00000563991 1082 ntBASIC14.9□□□□□ -0.02
YBX1P67809 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.9□□□□□ -0.02
YBX1P67809 AC124283.3-201ENST00000570869 594 ntBASIC14.9□□□□□ -0.02
YBX1P67809 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.9□□□□□ -0.02
YBX1P67809 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.9□□□□□ -0.02
YBX1P67809 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.9□□□□□ -0.02
YBX1P67809 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
YBX1P67809 RPSAP52-203ENST00000622976 1023 ntBASIC14.9□□□□□ -0.02
YBX1P67809 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.9□□□□□ -0.02
YBX1P67809 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
YBX1P67809 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
YBX1P67809 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.9□□□□□ -0.02
YBX1P67809 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
YBX1P67809 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
YBX1P67809 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
YBX1P67809 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.89□□□□□ -0.03
YBX1P67809 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.89□□□□□ -0.03
YBX1P67809 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.89□□□□□ -0.03
YBX1P67809 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
YBX1P67809 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
YBX1P67809 INTS4P2-202ENST00000614726 2019 ntBASIC14.89□□□□□ -0.03
YBX1P67809 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.89□□□□□ -0.03
YBX1P67809 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.89□□□□□ -0.03
YBX1P67809 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.89□□□□□ -0.03
YBX1P67809 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.89□□□□□ -0.03
YBX1P67809 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.89□□□□□ -0.03
YBX1P67809 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.89□□□□□ -0.03
YBX1P67809 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.89□□□□□ -0.03
YBX1P67809 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.89□□□□□ -0.03
YBX1P67809 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
YBX1P67809 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
YBX1P67809 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
YBX1P67809 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
YBX1P67809 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.89□□□□□ -0.03
YBX1P67809 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
YBX1P67809 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms