Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CLDN8P56748 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLDN8P56748 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 AC139749.1-202ENST00000617529 3139 ntBASIC14.55□□□□□ -0.08
CLDN8P56748 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLDN8P56748 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 KRT18P13-201ENST00000400056 1290 ntBASIC14.55□□□□□ -0.08
CLDN8P56748 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.55□□□□□ -0.08
CLDN8P56748 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.55□□□□□ -0.08
CLDN8P56748 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.55□□□□□ -0.08
CLDN8P56748 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 AC067863.1-201ENST00000494933 530 ntBASIC14.55□□□□□ -0.08
CLDN8P56748 MEIS3P1-201ENST00000495167 958 ntBASIC14.55□□□□□ -0.08
CLDN8P56748 AC097493.3-201ENST00000509725 367 ntBASIC14.55□□□□□ -0.08
CLDN8P56748 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.55□□□□□ -0.08
CLDN8P56748 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 AL158212.4-201ENST00000624062 1286 ntBASIC14.55□□□□□ -0.08
CLDN8P56748 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.55□□□□□ -0.08
CLDN8P56748 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.55□□□□□ -0.08
CLDN8P56748 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CLDN8P56748 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN8P56748 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CLDN8P56748 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CLDN8P56748 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN8P56748 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN8P56748 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CLDN8P56748 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CLDN8P56748 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN8P56748 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.54□□□□□ -0.08
CLDN8P56748 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN8P56748 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.54□□□□□ -0.08
CLDN8P56748 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CLDN8P56748 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CLDN8P56748 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 AC079781.4-201ENST00000641908 219 ntBASIC14.54□□□□□ -0.08
CLDN8P56748 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN8P56748 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 AC100757.3-201ENST00000622361 1406 ntBASIC14.54□□□□□ -0.08
CLDN8P56748 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN8P56748 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN8P56748 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN8P56748 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CLDN8P56748 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CLDN8P56748 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CLDN8P56748 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms