Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH13P55290 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH13P55290 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDH13P55290 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDH13P55290 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDH13P55290 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH13P55290 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDH13P55290 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDH13P55290 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 AC097359.2-201ENST00000604992 2389 ntBASIC15.01□□□□□ -0.01
CDH13P55290 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH13P55290 CNN2P2-201ENST00000443536 909 ntBASIC15.01□□□□□ -0.01
CDH13P55290 CNN2P3-201ENST00000450201 906 ntBASIC15.01□□□□□ -0.01
CDH13P55290 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDH13P55290 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.01□□□□□ -0.01
CDH13P55290 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH13P55290 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDH13P55290 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH13P55290 AC004449.1-201ENST00000564240 433 ntBASIC15.01□□□□□ -0.01
CDH13P55290 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
CDH13P55290 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH13P55290 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH13P55290 AL136317.3-201ENST00000618497 906 ntBASIC15.01□□□□□ -0.01
CDH13P55290 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDH13P55290 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH13P55290 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH13P55290 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH13P55290 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH13P55290 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH13P55290 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15□□□□□ -0.01
CDH13P55290 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
CDH13P55290 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
CDH13P55290 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15□□□□□ -0.01
CDH13P55290 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH13P55290 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 LINC01230-201ENST00000625222 3017 ntBASIC15□□□□□ -0.01
CDH13P55290 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15□□□□□ -0.01
CDH13P55290 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDH13P55290 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15□□□□□ -0.01
CDH13P55290 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15□□□□□ -0.01
CDH13P55290 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15□□□□□ -0.01
CDH13P55290 SDHAP3-202ENST00000515467 728 ntBASIC15□□□□□ -0.01
CDH13P55290 AC069120.2-201ENST00000524091 540 ntBASIC15□□□□□ -0.01
CDH13P55290 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15□□□□□ -0.01
CDH13P55290 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15□□□□□ -0.01
CDH13P55290 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15□□□□□ -0.01
CDH13P55290 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH13P55290 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15□□□□□ -0.01
CDH13P55290 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 AC138969.3-201ENST00000546612 1459 ntBASIC15□□□□□ -0.01
CDH13P55290 AC138932.2-201ENST00000548268 1459 ntBASIC15□□□□□ -0.01
CDH13P55290 AC126755.4-201ENST00000549796 1459 ntBASIC15□□□□□ -0.01
CDH13P55290 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH13P55290 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms