Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PDX1P52945 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PDX1P52945 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
PDX1P52945 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PDX1P52945 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.85□□□□□ -0.03
PDX1P52945 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.85□□□□□ -0.03
PDX1P52945 KRT18P25-201ENST00000508931 1278 ntBASIC14.85□□□□□ -0.03
PDX1P52945 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.85□□□□□ -0.03
PDX1P52945 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.85□□□□□ -0.03
PDX1P52945 MIR4741-201ENST00000579822 90 ntBASIC14.85□□□□□ -0.03
PDX1P52945 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.85□□□□□ -0.03
PDX1P52945 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 AC005695.3-201ENST00000614522 232 ntBASIC14.85□□□□□ -0.03
PDX1P52945 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.85□□□□□ -0.03
PDX1P52945 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
PDX1P52945 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.85□□□□□ -0.03
PDX1P52945 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PDX1P52945 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
PDX1P52945 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PDX1P52945 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.84□□□□□ -0.03
PDX1P52945 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.84□□□□□ -0.03
PDX1P52945 TSPY26P-202ENST00000565928 3884 ntBASIC14.84□□□□□ -0.03
PDX1P52945 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PDX1P52945 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.84□□□□□ -0.03
PDX1P52945 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.84□□□□□ -0.03
PDX1P52945 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.84□□□□□ -0.03
PDX1P52945 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PDX1P52945 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PDX1P52945 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.84□□□□□ -0.03
PDX1P52945 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.84□□□□□ -0.03
PDX1P52945 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.84□□□□□ -0.03
PDX1P52945 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.84□□□□□ -0.03
PDX1P52945 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.84□□□□□ -0.03
PDX1P52945 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.84□□□□□ -0.03
PDX1P52945 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.84□□□□□ -0.03
PDX1P52945 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.84□□□□□ -0.03
PDX1P52945 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.84□□□□□ -0.03
PDX1P52945 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.84□□□□□ -0.03
PDX1P52945 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.84□□□□□ -0.03
PDX1P52945 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PDX1P52945 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.84□□□□□ -0.03
PDX1P52945 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms