Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBP50607 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBP50607 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.14■□□□□ 0.17
TUBP50607 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.14■□□□□ 0.17
TUBP50607 MIR1909-201ENST00000411312 80 ntBASIC16.14■□□□□ 0.17
TUBP50607 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.14■□□□□ 0.17
TUBP50607 AP005482.1-201ENST00000563722 1273 ntBASIC16.14■□□□□ 0.17
TUBP50607 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBP50607 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 AP005019.2-201ENST00000615104 511 ntBASIC16.14■□□□□ 0.17
TUBP50607 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBP50607 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBP50607 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBP50607 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 AC134312.5-201ENST00000568031 1313 ntBASIC16.14■□□□□ 0.17
TUBP50607 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBP50607 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBP50607 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.14■□□□□ 0.17
TUBP50607 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.13■□□□□ 0.17
TUBP50607 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBP50607 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TUBP50607 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
TUBP50607 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBP50607 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.13■□□□□ 0.17
TUBP50607 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBP50607 RPL5P21-201ENST00000404620 815 ntBASIC16.13■□□□□ 0.17
TUBP50607 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.13■□□□□ 0.17
TUBP50607 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TUBP50607 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.13■□□□□ 0.17
TUBP50607 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBP50607 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.13■□□□□ 0.17
TUBP50607 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBP50607 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBP50607 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBP50607 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TUBP50607 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBP50607 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 FLJ16779-201ENST00000612722 7638 ntBASIC16.13■□□□□ 0.17
TUBP50607 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBP50607 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TUBP50607 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBP50607 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TUBP50607 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.12■□□□□ 0.17
TUBP50607 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.12■□□□□ 0.17
TUBP50607 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TUBP50607 AC092933.1-201ENST00000393644 945 ntBASIC16.12■□□□□ 0.17
TUBP50607 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.12■□□□□ 0.17
TUBP50607 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TUBP50607 AP001582.1-201ENST00000525856 295 ntBASIC16.12■□□□□ 0.17
TUBP50607 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TUBP50607 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.12■□□□□ 0.17
TUBP50607 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms