Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CX3CR1P49238 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CX3CR1P49238 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.51□□□□□ -0.25
CX3CR1P49238 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.51□□□□□ -0.25
CX3CR1P49238 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.51□□□□□ -0.25
CX3CR1P49238 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 AL390755.1-201ENST00000623716 2027 ntBASIC13.51□□□□□ -0.25
CX3CR1P49238 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CX3CR1P49238 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.5□□□□□ -0.25
CX3CR1P49238 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CX3CR1P49238 AC138969.3-201ENST00000546612 1459 ntBASIC13.5□□□□□ -0.25
CX3CR1P49238 AC138932.2-201ENST00000548268 1459 ntBASIC13.5□□□□□ -0.25
CX3CR1P49238 AC126755.4-201ENST00000549796 1459 ntBASIC13.5□□□□□ -0.25
CX3CR1P49238 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.5□□□□□ -0.25
CX3CR1P49238 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CX3CR1P49238 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CX3CR1P49238 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.5□□□□□ -0.25
CX3CR1P49238 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.5□□□□□ -0.25
CX3CR1P49238 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.5□□□□□ -0.25
CX3CR1P49238 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.5□□□□□ -0.25
CX3CR1P49238 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CX3CR1P49238 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.5□□□□□ -0.25
CX3CR1P49238 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.5□□□□□ -0.25
CX3CR1P49238 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.5□□□□□ -0.25
CX3CR1P49238 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.5□□□□□ -0.25
CX3CR1P49238 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.5□□□□□ -0.25
CX3CR1P49238 AL844908.2-201ENST00000609461 460 ntBASIC13.5□□□□□ -0.25
CX3CR1P49238 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CX3CR1P49238 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.5□□□□□ -0.25
CX3CR1P49238 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CX3CR1P49238 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CX3CR1P49238 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.5□□□□□ -0.25
CX3CR1P49238 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.5□□□□□ -0.25
CX3CR1P49238 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CX3CR1P49238 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CX3CR1P49238 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 AP000845.1-201ENST00000581677 2131 ntBASIC13.49□□□□□ -0.25
CX3CR1P49238 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.49□□□□□ -0.25
CX3CR1P49238 AC100757.3-201ENST00000622361 1406 ntBASIC13.49□□□□□ -0.25
CX3CR1P49238 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 ACE3P-201ENST00000423435 1973 ntBASIC13.49□□□□□ -0.25
CX3CR1P49238 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CX3CR1P49238 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 AC007686.3-201ENST00000619017 3487 ntBASIC13.49□□□□□ -0.25
CX3CR1P49238 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.49□□□□□ -0.25
CX3CR1P49238 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 MIR943-201ENST00000401286 94 ntBASIC13.49□□□□□ -0.25
CX3CR1P49238 FAM8A3P-201ENST00000427218 844 ntBASIC13.49□□□□□ -0.25
CX3CR1P49238 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.49□□□□□ -0.25
CX3CR1P49238 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.49□□□□□ -0.25
CX3CR1P49238 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.49□□□□□ -0.25
CX3CR1P49238 AC097493.3-201ENST00000509725 367 ntBASIC13.49□□□□□ -0.25
CX3CR1P49238 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.49□□□□□ -0.25
CX3CR1P49238 TIMM17BP1-201ENST00000545713 516 ntBASIC13.49□□□□□ -0.25
CX3CR1P49238 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CX3CR1P49238 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CX3CR1P49238 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.49□□□□□ -0.25
CX3CR1P49238 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms