Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.91□□□□□ -0.02
KRT6CP48668 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.91□□□□□ -0.02
KRT6CP48668 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT6CP48668 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT6CP48668 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.9□□□□□ -0.02
KRT6CP48668 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.9□□□□□ -0.02
KRT6CP48668 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
KRT6CP48668 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
KRT6CP48668 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
KRT6CP48668 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
KRT6CP48668 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
KRT6CP48668 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
KRT6CP48668 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
KRT6CP48668 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
KRT6CP48668 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.9□□□□□ -0.02
KRT6CP48668 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.9□□□□□ -0.02
KRT6CP48668 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.9□□□□□ -0.02
KRT6CP48668 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.9□□□□□ -0.02
KRT6CP48668 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
KRT6CP48668 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.9□□□□□ -0.02
KRT6CP48668 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.9□□□□□ -0.02
KRT6CP48668 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.9□□□□□ -0.02
KRT6CP48668 AL158211.3-201ENST00000607385 239 ntBASIC14.9□□□□□ -0.02
KRT6CP48668 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.9□□□□□ -0.02
KRT6CP48668 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
KRT6CP48668 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.9□□□□□ -0.02
KRT6CP48668 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.9□□□□□ -0.02
KRT6CP48668 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 AL390755.1-201ENST00000623716 2027 ntBASIC14.9□□□□□ -0.02
KRT6CP48668 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
KRT6CP48668 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
KRT6CP48668 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KRT6CP48668 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.89□□□□□ -0.03
KRT6CP48668 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.89□□□□□ -0.03
KRT6CP48668 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 SNX18-202ENST00000343017 3140 ntBASIC14.89□□□□□ -0.03
KRT6CP48668 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT6CP48668 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.89□□□□□ -0.03
KRT6CP48668 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT6CP48668 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT6CP48668 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
KRT6CP48668 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.89□□□□□ -0.03
KRT6CP48668 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 AC104457.1-201ENST00000401024 814 ntBASIC14.89□□□□□ -0.03
KRT6CP48668 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.89□□□□□ -0.03
KRT6CP48668 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT6CP48668 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.89□□□□□ -0.03
KRT6CP48668 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.89□□□□□ -0.03
KRT6CP48668 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT6CP48668 AC044860.1-202ENST00000559481 777 ntBASIC14.89□□□□□ -0.03
KRT6CP48668 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.89□□□□□ -0.03
KRT6CP48668 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT6CP48668 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.89□□□□□ -0.03
KRT6CP48668 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.89□□□□□ -0.03
KRT6CP48668 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.89□□□□□ -0.03
KRT6CP48668 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
KRT6CP48668 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.89□□□□□ -0.03
KRT6CP48668 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT6CP48668 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.89□□□□□ -0.03
KRT6CP48668 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
KRT6CP48668 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
KRT6CP48668 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT6CP48668 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT6CP48668 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms