Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRIM23P36406 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM23P36406 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.01□□□□□ -0.01
TRIM23P36406 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM23P36406 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 AC092384.3-202ENST00000564646 2873 ntBASIC15.01□□□□□ -0.01
TRIM23P36406 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM23P36406 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM23P36406 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRIM23P36406 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRIM23P36406 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 MIR1202-201ENST00000408529 83 ntBASIC15.01□□□□□ -0.01
TRIM23P36406 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM23P36406 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM23P36406 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM23P36406 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM23P36406 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM23P36406 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.01□□□□□ -0.01
TRIM23P36406 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.01□□□□□ -0.01
TRIM23P36406 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM23P36406 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM23P36406 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM23P36406 AC010328.2-201ENST00000597698 1111 ntBASIC15.01□□□□□ -0.01
TRIM23P36406 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM23P36406 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM23P36406 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM23P36406 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM23P36406 MROH4P-201ENST00000431302 1578 ntBASIC15.01□□□□□ -0.01
TRIM23P36406 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRIM23P36406 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM23P36406 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM23P36406 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRIM23P36406 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM23P36406 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRIM23P36406 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 AC055811.4-201ENST00000624039 1754 ntBASIC15.01□□□□□ -0.01
TRIM23P36406 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM23P36406 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRIM23P36406 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRIM23P36406 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15□□□□□ -0.01
TRIM23P36406 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
TRIM23P36406 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
TRIM23P36406 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15□□□□□ -0.01
TRIM23P36406 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15□□□□□ -0.01
TRIM23P36406 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 MIR1908-201ENST00000410394 80 ntBASIC15□□□□□ -0.01
TRIM23P36406 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15□□□□□ -0.01
TRIM23P36406 ACTBP11-201ENST00000436287 1126 ntBASIC15□□□□□ -0.01
TRIM23P36406 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15□□□□□ -0.01
TRIM23P36406 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15□□□□□ -0.01
TRIM23P36406 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15□□□□□ -0.01
TRIM23P36406 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15□□□□□ -0.01
TRIM23P36406 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15□□□□□ -0.01
TRIM23P36406 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15□□□□□ -0.01
TRIM23P36406 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
TRIM23P36406 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15□□□□□ -0.01
TRIM23P36406 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15□□□□□ -0.01
TRIM23P36406 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15□□□□□ -0.01
TRIM23P36406 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15□□□□□ -0.01
TRIM23P36406 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM23P36406 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRIM23P36406 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms