Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRT9P35527 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KRT9P35527 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT9P35527 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT9P35527 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT9P35527 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.79■□□□□ 0.28
KRT9P35527 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT9P35527 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT9P35527 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT9P35527 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 AC015910.1-201ENST00000579400 975 ntBASIC16.79■□□□□ 0.28
KRT9P35527 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.79■□□□□ 0.28
KRT9P35527 TEX28P1-201ENST00000613479 1221 ntBASIC16.79■□□□□ 0.28
KRT9P35527 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.79■□□□□ 0.28
KRT9P35527 TEX28P2-201ENST00000617764 1221 ntBASIC16.79■□□□□ 0.28
KRT9P35527 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT9P35527 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRT9P35527 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRT9P35527 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
KRT9P35527 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT9P35527 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT9P35527 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 LINC01230-201ENST00000625222 3017 ntBASIC16.79■□□□□ 0.28
KRT9P35527 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
KRT9P35527 AC097359.2-201ENST00000604992 2389 ntBASIC16.79■□□□□ 0.28
KRT9P35527 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT9P35527 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT9P35527 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT9P35527 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT9P35527 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 BX640514.1-201ENST00000583223 1918 ntBASIC16.78■□□□□ 0.28
KRT9P35527 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT9P35527 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KRT9P35527 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT9P35527 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT9P35527 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
KRT9P35527 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
KRT9P35527 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT9P35527 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT9P35527 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT9P35527 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.78■□□□□ 0.28
KRT9P35527 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT9P35527 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT9P35527 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.78■□□□□ 0.28
KRT9P35527 GPALPP1-207ENST00000611650 899 ntBASIC16.78■□□□□ 0.28
KRT9P35527 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.78■□□□□ 0.28
KRT9P35527 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
KRT9P35527 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KRT9P35527 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KRT9P35527 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT9P35527 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT9P35527 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
KRT9P35527 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KRT9P35527 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT9P35527 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT9P35527 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT9P35527 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
KRT9P35527 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
KRT9P35527 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
KRT9P35527 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT9P35527 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.77■□□□□ 0.28
KRT9P35527 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT9P35527 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT9P35527 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT9P35527 REXO1L4P-201ENST00000605109 1937 ntBASIC16.77■□□□□ 0.28
KRT9P35527 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT9P35527 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KRT9P35527 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.77■□□□□ 0.28
KRT9P35527 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT9P35527 RN7SL618P-201ENST00000477850 296 ntBASIC16.77■□□□□ 0.28
KRT9P35527 SLED1-202ENST00000512051 380 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms