Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.16■□□□□ 0.18
RFC1P35251 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.16■□□□□ 0.18
RFC1P35251 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.16■□□□□ 0.18
RFC1P35251 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RFC1P35251 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFC1P35251 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.16■□□□□ 0.18
RFC1P35251 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.15■□□□□ 0.18
RFC1P35251 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RFC1P35251 SLC7A15P-201ENST00000424028 1363 ntBASIC16.15■□□□□ 0.18
RFC1P35251 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.15■□□□□ 0.18
RFC1P35251 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.15■□□□□ 0.18
RFC1P35251 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RFC1P35251 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.15■□□□□ 0.18
RFC1P35251 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RFC1P35251 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RFC1P35251 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.15■□□□□ 0.18
RFC1P35251 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RFC1P35251 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.15■□□□□ 0.18
RFC1P35251 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RFC1P35251 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.15■□□□□ 0.18
RFC1P35251 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.15■□□□□ 0.18
RFC1P35251 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.15■□□□□ 0.18
RFC1P35251 AC093004.1-201ENST00000508850 424 ntBASIC16.15■□□□□ 0.18
RFC1P35251 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.15■□□□□ 0.18
RFC1P35251 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.15■□□□□ 0.18
RFC1P35251 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.15■□□□□ 0.18
RFC1P35251 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.15■□□□□ 0.18
RFC1P35251 SPCS2P1-201ENST00000561636 679 ntBASIC16.15■□□□□ 0.18
RFC1P35251 RRP7BP-205ENST00000566851 833 ntBASIC16.15■□□□□ 0.18
RFC1P35251 SAMD11P1-201ENST00000571429 661 ntBASIC16.15■□□□□ 0.18
RFC1P35251 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.15■□□□□ 0.18
RFC1P35251 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 AL096865.1-201ENST00000606796 927 ntBASIC16.15■□□□□ 0.18
RFC1P35251 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.15■□□□□ 0.18
RFC1P35251 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.15■□□□□ 0.18
RFC1P35251 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RFC1P35251 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.15■□□□□ 0.18
RFC1P35251 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
RFC1P35251 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.15■□□□□ 0.18
RFC1P35251 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFC1P35251 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
RFC1P35251 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFC1P35251 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFC1P35251 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC1P35251 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC1P35251 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.14■□□□□ 0.17
RFC1P35251 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFC1P35251 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.14■□□□□ 0.17
RFC1P35251 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
RFC1P35251 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC1P35251 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.14■□□□□ 0.17
RFC1P35251 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC1P35251 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.14■□□□□ 0.17
RFC1P35251 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.14■□□□□ 0.17
RFC1P35251 AC026410.3-201ENST00000514280 936 ntBASIC16.14■□□□□ 0.17
RFC1P35251 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.14■□□□□ 0.17
RFC1P35251 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.14■□□□□ 0.17
RFC1P35251 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.14■□□□□ 0.17
RFC1P35251 AC011467.4-201ENST00000594891 528 ntBASIC16.14■□□□□ 0.17
RFC1P35251 AL049840.4-201ENST00000602422 811 ntBASIC16.14■□□□□ 0.17
RFC1P35251 AL355385.1-201ENST00000606123 409 ntBASIC16.14■□□□□ 0.17
RFC1P35251 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFC1P35251 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms