Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
RFC4P35249 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 AC006058.4-201ENST00000624016 1670 ntBASIC18.96■□□□□ 0.63
RFC4P35249 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RFC4P35249 RPS9P1-201ENST00000419943 583 ntBASIC18.96■□□□□ 0.63
RFC4P35249 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.96■□□□□ 0.63
RFC4P35249 RN7SL258P-201ENST00000478664 300 ntBASIC18.96■□□□□ 0.63
RFC4P35249 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.96■□□□□ 0.63
RFC4P35249 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.96■□□□□ 0.63
RFC4P35249 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.96■□□□□ 0.63
RFC4P35249 AC005962.1-201ENST00000584100 773 ntBASIC18.96■□□□□ 0.63
RFC4P35249 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.96■□□□□ 0.63
RFC4P35249 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.96■□□□□ 0.63
RFC4P35249 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.96■□□□□ 0.63
RFC4P35249 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 AC136759.1-202ENST00000530858 2194 ntBASIC18.96■□□□□ 0.63
RFC4P35249 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RFC4P35249 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.96■□□□□ 0.63
RFC4P35249 AC074138.1-201ENST00000611182 1303 ntBASIC18.96■□□□□ 0.63
RFC4P35249 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFC4P35249 AC020916.1-201ENST00000587762 1774 ntBASIC18.96■□□□□ 0.63
RFC4P35249 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RFC4P35249 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RFC4P35249 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.95■□□□□ 0.62
RFC4P35249 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
RFC4P35249 PCDH8P1-201ENST00000428983 2773 ntBASIC18.95■□□□□ 0.62
RFC4P35249 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.95■□□□□ 0.62
RFC4P35249 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RFC4P35249 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RFC4P35249 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 OR2K2-202ENST00000374428 1038 ntBASIC18.95■□□□□ 0.62
RFC4P35249 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.95■□□□□ 0.62
RFC4P35249 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 RPL7P35-201ENST00000446943 740 ntBASIC18.95■□□□□ 0.62
RFC4P35249 RN7SL67P-201ENST00000492147 296 ntBASIC18.95■□□□□ 0.62
RFC4P35249 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.95■□□□□ 0.62
RFC4P35249 AC026803.1-201ENST00000569130 274 ntBASIC18.95■□□□□ 0.62
RFC4P35249 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.95■□□□□ 0.62
RFC4P35249 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFC4P35249 KRT8P21-201ENST00000430398 1491 ntBASIC18.95■□□□□ 0.62
RFC4P35249 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RFC4P35249 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.94■□□□□ 0.62
RFC4P35249 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.94■□□□□ 0.62
RFC4P35249 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 FAM90A2P-201ENST00000511144 1395 ntBASIC18.94■□□□□ 0.62
RFC4P35249 FAM90A25P-201ENST00000528404 1395 ntBASIC18.94■□□□□ 0.62
RFC4P35249 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RFC4P35249 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RFC4P35249 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RFC4P35249 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 RN7SKP230-201ENST00000365642 335 ntBASIC18.94■□□□□ 0.62
RFC4P35249 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RFC4P35249 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.94■□□□□ 0.62
RFC4P35249 RPL13AP19-201ENST00000434320 584 ntBASIC18.94■□□□□ 0.62
RFC4P35249 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.94■□□□□ 0.62
RFC4P35249 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.94■□□□□ 0.62
RFC4P35249 AC008723.1-201ENST00000506922 207 ntBASIC18.94■□□□□ 0.62
RFC4P35249 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.94■□□□□ 0.62
RFC4P35249 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RFC4P35249 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RFC4P35249 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.94■□□□□ 0.62
RFC4P35249 MIR6842-201ENST00000612539 65 ntBASIC18.94■□□□□ 0.62
RFC4P35249 AC009084.3-201ENST00000623356 437 ntBASIC18.94■□□□□ 0.62
RFC4P35249 Z98259.2-201ENST00000641583 609 ntBASIC18.94■□□□□ 0.62
RFC4P35249 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.94■□□□□ 0.62
RFC4P35249 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.94■□□□□ 0.62
RFC4P35249 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFC4P35249 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.94■□□□□ 0.62
RFC4P35249 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms