Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6P35125 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6P35125 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6P35125 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USP6P35125 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC20.23■□□□□ 0.83
USP6P35125 IGLV3-15-201ENST00000518356 244 ntBASIC20.23■□□□□ 0.83
USP6P35125 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC20.23■□□□□ 0.83
USP6P35125 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC20.23■□□□□ 0.83
USP6P35125 TBC1D3J-201ENST00000620719 1426 ntBASIC20.23■□□□□ 0.83
USP6P35125 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6P35125 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6P35125 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP6P35125 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
USP6P35125 AC013726.1-201ENST00000563747 2285 ntBASIC20.23■□□□□ 0.83
USP6P35125 AC144522.1-201ENST00000625111 1658 ntBASIC20.23■□□□□ 0.83
USP6P35125 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP6P35125 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP6P35125 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC20.23■□□□□ 0.83
USP6P35125 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.23■□□□□ 0.83
USP6P35125 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
USP6P35125 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC20.22■□□□□ 0.83
USP6P35125 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 OR2K2-202ENST00000374428 1038 ntBASIC20.22■□□□□ 0.83
USP6P35125 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC20.22■□□□□ 0.83
USP6P35125 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.22■□□□□ 0.83
USP6P35125 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC20.22■□□□□ 0.83
USP6P35125 AC073352.2-201ENST00000609385 439 ntBASIC20.22■□□□□ 0.83
USP6P35125 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
USP6P35125 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
USP6P35125 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC20.22■□□□□ 0.83
USP6P35125 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP6P35125 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.22■□□□□ 0.83
USP6P35125 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.21■□□□□ 0.83
USP6P35125 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC20.21■□□□□ 0.83
USP6P35125 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC20.21■□□□□ 0.83
USP6P35125 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 AC026316.1-201ENST00000398900 414 ntBASIC20.21■□□□□ 0.83
USP6P35125 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
USP6P35125 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.21■□□□□ 0.83
USP6P35125 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 CCNC-217ENST00000523985 958 ntTSL 2 BASIC20.21■□□□□ 0.83
USP6P35125 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC20.21■□□□□ 0.83
USP6P35125 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC20.21■□□□□ 0.83
USP6P35125 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC20.21■□□□□ 0.83
USP6P35125 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 AC027601.3-201ENST00000622907 509 ntBASIC20.21■□□□□ 0.83
USP6P35125 DDX5-235ENST00000630471 473 ntTSL 4 BASIC20.21■□□□□ 0.83
USP6P35125 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.21■□□□□ 0.83
USP6P35125 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
USP6P35125 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20.21■□□□□ 0.83
USP6P35125 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
USP6P35125 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
USP6P35125 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.21■□□□□ 0.83
USP6P35125 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
USP6P35125 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC20.21■□□□□ 0.83
USP6P35125 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP6P35125 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
USP6P35125 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
USP6P35125 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC20.2■□□□□ 0.82
USP6P35125 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC20.2■□□□□ 0.82
USP6P35125 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC20.2■□□□□ 0.82
USP6P35125 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP6P35125 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
USP6P35125 NPM1P43-201ENST00000558669 786 ntBASIC20.2■□□□□ 0.82
USP6P35125 MIR3147-201ENST00000577811 66 ntBASIC20.2■□□□□ 0.82
USP6P35125 MIR3677-201ENST00000578964 60 ntBASIC20.2■□□□□ 0.82
USP6P35125 AL109837.1-201ENST00000603272 613 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms