Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC6A4P31645 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
SLC6A4P31645 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC6A4P31645 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.63■□□□□ 0.09
SLC6A4P31645 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SLC6A4P31645 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC6A4P31645 TPM3P8-201ENST00000330554 643 ntBASIC15.63■□□□□ 0.09
SLC6A4P31645 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC6A4P31645 MIR1202-201ENST00000408529 83 ntBASIC15.63■□□□□ 0.09
SLC6A4P31645 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC6A4P31645 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC6A4P31645 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SLC6A4P31645 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 AL583810.1-201ENST00000553344 1045 ntBASIC15.63■□□□□ 0.09
SLC6A4P31645 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.63■□□□□ 0.09
SLC6A4P31645 AC008687.7-202ENST00000637404 953 ntBASIC15.63■□□□□ 0.09
SLC6A4P31645 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC6A4P31645 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC6A4P31645 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC6A4P31645 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SLC6A4P31645 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SLC6A4P31645 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SLC6A4P31645 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC6A4P31645 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC6A4P31645 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC6A4P31645 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.62■□□□□ 0.09
SLC6A4P31645 LILRP1-201ENST00000444199 1370 ntBASIC15.62■□□□□ 0.09
SLC6A4P31645 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SLC6A4P31645 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SLC6A4P31645 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
SLC6A4P31645 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.62■□□□□ 0.09
SLC6A4P31645 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.62■□□□□ 0.09
SLC6A4P31645 AC245100.3-201ENST00000441281 285 ntBASIC15.62■□□□□ 0.09
SLC6A4P31645 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.62■□□□□ 0.09
SLC6A4P31645 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.62■□□□□ 0.09
SLC6A4P31645 AC079316.1-201ENST00000548397 411 ntBASIC15.62■□□□□ 0.09
SLC6A4P31645 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.62■□□□□ 0.09
SLC6A4P31645 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.62■□□□□ 0.09
SLC6A4P31645 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC6A4P31645 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SLC6A4P31645 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC6A4P31645 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SLC6A4P31645 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC6A4P31645 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC6A4P31645 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A4P31645 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC6A4P31645 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A4P31645 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC6A4P31645 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SLC6A4P31645 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A4P31645 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A4P31645 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A4P31645 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A4P31645 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A4P31645 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A4P31645 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A4P31645 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SLC6A4P31645 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A4P31645 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC6A4P31645 AC006486.2-201ENST00000624246 2199 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms