Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.86□□□□□ -0.19
GDF1P27539 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.86□□□□□ -0.19
GDF1P27539 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
GDF1P27539 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
GDF1P27539 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.86□□□□□ -0.19
GDF1P27539 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
GDF1P27539 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.86□□□□□ -0.19
GDF1P27539 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.86□□□□□ -0.19
GDF1P27539 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.86□□□□□ -0.19
GDF1P27539 AC079316.1-201ENST00000548397 411 ntBASIC13.86□□□□□ -0.19
GDF1P27539 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.86□□□□□ -0.19
GDF1P27539 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.86□□□□□ -0.19
GDF1P27539 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.86□□□□□ -0.19
GDF1P27539 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.86□□□□□ -0.19
GDF1P27539 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.86□□□□□ -0.19
GDF1P27539 RHOXF1P1-202ENST00000635473 501 ntBASIC13.86□□□□□ -0.19
GDF1P27539 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.86□□□□□ -0.19
GDF1P27539 PRSS30P-206ENST00000641773 873 ntBASIC13.86□□□□□ -0.19
GDF1P27539 KRT8P14-201ENST00000414254 1442 ntBASIC13.86□□□□□ -0.19
GDF1P27539 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.86□□□□□ -0.19
GDF1P27539 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.86□□□□□ -0.19
GDF1P27539 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 OR2I1P-209ENST00000641730 5365 ntBASIC13.86□□□□□ -0.19
GDF1P27539 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
GDF1P27539 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.86□□□□□ -0.19
GDF1P27539 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.86□□□□□ -0.19
GDF1P27539 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GDF1P27539 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
GDF1P27539 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 AC136621.1-201ENST00000624017 2304 ntBASIC13.85□□□□□ -0.19
GDF1P27539 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.85□□□□□ -0.19
GDF1P27539 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.85□□□□□ -0.19
GDF1P27539 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GDF1P27539 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.85□□□□□ -0.19
GDF1P27539 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
GDF1P27539 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.85□□□□□ -0.19
GDF1P27539 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.85□□□□□ -0.19
GDF1P27539 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.85□□□□□ -0.19
GDF1P27539 HLA-V-201ENST00000429037 534 ntBASIC13.85□□□□□ -0.19
GDF1P27539 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GDF1P27539 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.85□□□□□ -0.19
GDF1P27539 BNIP3P42-201ENST00000454982 569 ntBASIC13.85□□□□□ -0.19
GDF1P27539 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GDF1P27539 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.85□□□□□ -0.19
GDF1P27539 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.85□□□□□ -0.19
GDF1P27539 AP000812.2-201ENST00000538934 718 ntBASIC13.85□□□□□ -0.19
GDF1P27539 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.85□□□□□ -0.19
GDF1P27539 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.85□□□□□ -0.19
GDF1P27539 BNIP3P29-201ENST00000598302 571 ntBASIC13.85□□□□□ -0.19
GDF1P27539 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.85□□□□□ -0.19
GDF1P27539 AC011447.5-201ENST00000616168 564 ntBASIC13.85□□□□□ -0.19
GDF1P27539 AC138951.2-201ENST00000623455 1161 ntBASIC13.85□□□□□ -0.19
GDF1P27539 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.85□□□□□ -0.19
GDF1P27539 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GDF1P27539 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms