Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.16□□□□□ -0.3
CD40P25942 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.16□□□□□ -0.3
CD40P25942 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 MIR1202-201ENST00000408529 83 ntBASIC13.16□□□□□ -0.3
CD40P25942 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.16□□□□□ -0.3
CD40P25942 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.16□□□□□ -0.3
CD40P25942 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CD40P25942 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.16□□□□□ -0.3
CD40P25942 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40P25942 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40P25942 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40P25942 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40P25942 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.16□□□□□ -0.3
CD40P25942 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.16□□□□□ -0.3
CD40P25942 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CD40P25942 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.16□□□□□ -0.3
CD40P25942 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.16□□□□□ -0.3
CD40P25942 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40P25942 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40P25942 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CD40P25942 REXO1L5P-201ENST00000622260 2098 ntBASIC13.16□□□□□ -0.3
CD40P25942 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD40P25942 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.16□□□□□ -0.3
CD40P25942 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40P25942 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CD40P25942 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.15□□□□□ -0.3
CD40P25942 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40P25942 AL360270.3-201ENST00000609118 1348 ntBASIC13.15□□□□□ -0.3
CD40P25942 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.15□□□□□ -0.3
CD40P25942 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CD40P25942 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CD40P25942 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CD40P25942 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40P25942 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.15□□□□□ -0.3
CD40P25942 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40P25942 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.15□□□□□ -0.3
CD40P25942 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 AL354989.2-201ENST00000435838 1540 ntBASIC13.15□□□□□ -0.3
CD40P25942 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.15□□□□□ -0.3
CD40P25942 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40P25942 BRWD1P1-201ENST00000401091 371 ntBASIC13.15□□□□□ -0.3
CD40P25942 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.15□□□□□ -0.3
CD40P25942 HLA-K-203ENST00000430151 1046 ntBASIC13.15□□□□□ -0.3
CD40P25942 AC245100.3-201ENST00000441281 285 ntBASIC13.15□□□□□ -0.3
CD40P25942 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.15□□□□□ -0.3
CD40P25942 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.15□□□□□ -0.3
CD40P25942 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.15□□□□□ -0.3
CD40P25942 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.15□□□□□ -0.3
CD40P25942 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CD40P25942 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 HYMAI-201ENST00000635591 3347 ntBASIC13.15□□□□□ -0.3
CD40P25942 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40P25942 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.15□□□□□ -0.3
CD40P25942 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 AC012508.2-201ENST00000567613 1472 ntBASIC13.15□□□□□ -0.3
CD40P25942 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD40P25942 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.15□□□□□ -0.3
CD40P25942 AC008741.2-201ENST00000612792 3115 ntBASIC13.15□□□□□ -0.31
CD40P25942 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CD40P25942 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CD40P25942 AC007950.2-201ENST00000615045 2347 ntBASIC13.14□□□□□ -0.31
CD40P25942 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 PAUPAR-201ENST00000630360 2965 ntBASIC13.14□□□□□ -0.31
CD40P25942 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.14□□□□□ -0.31
CD40P25942 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CD40P25942 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.14□□□□□ -0.31
CD40P25942 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.14□□□□□ -0.31
CD40P25942 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms