Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.37□□□□□ -0.11
CHMP24386 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.37□□□□□ -0.11
CHMP24386 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.37□□□□□ -0.11
CHMP24386 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 SPTLC1P1-201ENST00000447199 261 ntBASIC14.37□□□□□ -0.11
CHMP24386 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.37□□□□□ -0.11
CHMP24386 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.37□□□□□ -0.11
CHMP24386 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.37□□□□□ -0.11
CHMP24386 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.37□□□□□ -0.11
CHMP24386 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.37□□□□□ -0.11
CHMP24386 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.37□□□□□ -0.11
CHMP24386 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.37□□□□□ -0.11
CHMP24386 AC004233.3-201ENST00000607794 1269 ntBASIC14.37□□□□□ -0.11
CHMP24386 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.37□□□□□ -0.11
CHMP24386 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.37□□□□□ -0.11
CHMP24386 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.37□□□□□ -0.11
CHMP24386 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.37□□□□□ -0.11
CHMP24386 AL109936.8-201ENST00000641772 604 ntBASIC14.37□□□□□ -0.11
CHMP24386 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.37□□□□□ -0.11
CHMP24386 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.37□□□□□ -0.11
CHMP24386 AL137784.3-201ENST00000623858 2288 ntBASIC14.37□□□□□ -0.11
CHMP24386 CICP14-201ENST00000629111 2732 ntBASIC14.37□□□□□ -0.11
CHMP24386 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.37□□□□□ -0.11
CHMP24386 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.37□□□□□ -0.11
CHMP24386 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
CHMP24386 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP24386 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.36□□□□□ -0.11
CHMP24386 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.36□□□□□ -0.11
CHMP24386 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.36□□□□□ -0.11
CHMP24386 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CHMP24386 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CHMP24386 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.36□□□□□ -0.11
CHMP24386 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.36□□□□□ -0.11
CHMP24386 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.36□□□□□ -0.11
CHMP24386 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.36□□□□□ -0.11
CHMP24386 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 AL358472.5-202ENST00000641448 1267 ntBASIC14.36□□□□□ -0.11
CHMP24386 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.36□□□□□ -0.11
CHMP24386 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CHMP24386 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CHMP24386 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.36□□□□□ -0.11
CHMP24386 AC140479.7-201ENST00000636301 2332 ntBASIC14.36□□□□□ -0.11
CHMP24386 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CHMP24386 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP24386 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.35□□□□□ -0.11
CHMP24386 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.35□□□□□ -0.11
CHMP24386 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 OR2I1P-210ENST00000642037 4691 ntBASIC14.35□□□□□ -0.11
CHMP24386 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP24386 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CHMP24386 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms