Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDH3P22223 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CDH3P22223 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CDH3P22223 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.09■□□□□ 0.01
CDH3P22223 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CDH3P22223 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDH3P22223 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH3P22223 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH3P22223 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDH3P22223 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.09■□□□□ 0.01
CDH3P22223 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CDH3P22223 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.08■□□□□ 0.01
CDH3P22223 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH3P22223 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
CDH3P22223 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.08■□□□□ 0.01
CDH3P22223 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CDH3P22223 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CDH3P22223 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.08■□□□□ 0.01
CDH3P22223 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.08■□□□□ 0.01
CDH3P22223 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH3P22223 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDH3P22223 AL121723.1-201ENST00000445194 1519 ntBASIC15.08■□□□□ 0.01
CDH3P22223 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.08■□□□□ 0.01
CDH3P22223 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDH3P22223 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.08■□□□□ 0
CDH3P22223 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.08■□□□□ 0
CDH3P22223 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
CDH3P22223 CICP24-201ENST00000605464 2705 ntBASIC15.08■□□□□ 0
CDH3P22223 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDH3P22223 AL512384.1-201ENST00000406683 331 ntBASIC15.08■□□□□ 0
CDH3P22223 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.08■□□□□ 0
CDH3P22223 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.08■□□□□ 0
CDH3P22223 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.08■□□□□ 0
CDH3P22223 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.08■□□□□ 0
CDH3P22223 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.08■□□□□ 0
CDH3P22223 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.08■□□□□ 0
CDH3P22223 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
CDH3P22223 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.08■□□□□ 0
CDH3P22223 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CDH3P22223 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.08■□□□□ 0
CDH3P22223 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CDH3P22223 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.08■□□□□ 0
CDH3P22223 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
CDH3P22223 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CDH3P22223 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.08■□□□□ 0
CDH3P22223 PRAL-201ENST00000624952 3286 ntBASIC15.08■□□□□ 0
CDH3P22223 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.08■□□□□ 0
CDH3P22223 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CDH3P22223 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.08■□□□□ 0
CDH3P22223 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CDH3P22223 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
CDH3P22223 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH3P22223 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.07■□□□□ 0
CDH3P22223 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.07■□□□□ 0
CDH3P22223 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDH3P22223 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CDH3P22223 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
CDH3P22223 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.07■□□□□ 0
CDH3P22223 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CDH3P22223 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
CDH3P22223 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CDH3P22223 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.07■□□□□ 0
CDH3P22223 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.07■□□□□ 0
CDH3P22223 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.07■□□□□ 0
CDH3P22223 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.07■□□□□ 0
CDH3P22223 RPL13AP25-201ENST00000484130 612 ntBASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms