Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RAB3BP20337 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAB3BP20337 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RAB3BP20337 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB3BP20337 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB3BP20337 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RAB3BP20337 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RAB3BP20337 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB3BP20337 AC011474.4-201ENST00000623523 2076 ntBASIC13.46□□□□□ -0.25
RAB3BP20337 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB3BP20337 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RAB3BP20337 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RAB3BP20337 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RAB3BP20337 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 HLA-H-201ENST00000383620 1096 ntBASIC13.46□□□□□ -0.25
RAB3BP20337 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB3BP20337 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB3BP20337 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.46□□□□□ -0.25
RAB3BP20337 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.46□□□□□ -0.25
RAB3BP20337 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.46□□□□□ -0.25
RAB3BP20337 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
RAB3BP20337 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.46□□□□□ -0.25
RAB3BP20337 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.46□□□□□ -0.25
RAB3BP20337 AC112191.1-201ENST00000523689 701 ntBASIC13.46□□□□□ -0.25
RAB3BP20337 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.46□□□□□ -0.25
RAB3BP20337 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RAB3BP20337 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.46□□□□□ -0.25
RAB3BP20337 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB3BP20337 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RAB3BP20337 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB3BP20337 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RAB3BP20337 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB3BP20337 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
RAB3BP20337 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.46□□□□□ -0.26
RAB3BP20337 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB3BP20337 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB3BP20337 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
RAB3BP20337 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB3BP20337 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
RAB3BP20337 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RAB3BP20337 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
RAB3BP20337 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RAB3BP20337 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.45□□□□□ -0.26
RAB3BP20337 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 AKAP8P1-201ENST00000434743 1349 ntBASIC13.45□□□□□ -0.26
RAB3BP20337 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB3BP20337 REXO1L4P-201ENST00000605109 1937 ntBASIC13.45□□□□□ -0.26
RAB3BP20337 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RAB3BP20337 MST1P2-201ENST00000457982 2291 ntBASIC13.45□□□□□ -0.26
RAB3BP20337 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.45□□□□□ -0.26
RAB3BP20337 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB3BP20337 RNA5SP415-201ENST00000517246 115 ntBASIC13.45□□□□□ -0.26
RAB3BP20337 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB3BP20337 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.45□□□□□ -0.26
RAB3BP20337 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.45□□□□□ -0.26
RAB3BP20337 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.45□□□□□ -0.26
RAB3BP20337 AC099522.2-201ENST00000607001 744 ntBASIC13.45□□□□□ -0.26
RAB3BP20337 MIR7706-201ENST00000613747 67 ntBASIC13.45□□□□□ -0.26
RAB3BP20337 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB3BP20337 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RAB3BP20337 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.45□□□□□ -0.26
RAB3BP20337 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RAB3BP20337 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB3BP20337 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB3BP20337 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.45□□□□□ -0.26
RAB3BP20337 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB3BP20337 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RAB3BP20337 AC007787.1-201ENST00000588095 1583 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms