Protein–RNA interactions for Protein: P15088

CPA3, Mast cell carboxypeptidase A, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA3P15088 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPA3P15088 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPA3P15088 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPA3P15088 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
CPA3P15088 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPA3P15088 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.19■□□□□ 0.02
CPA3P15088 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPA3P15088 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.19■□□□□ 0.02
CPA3P15088 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CPA3P15088 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPA3P15088 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPA3P15088 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CPA3P15088 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CPA3P15088 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CPA3P15088 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CPA3P15088 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.18■□□□□ 0.02
CPA3P15088 HSPA7-201ENST00000445535 1927 ntBASIC15.18■□□□□ 0.02
CPA3P15088 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CPA3P15088 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CPA3P15088 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CPA3P15088 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CPA3P15088 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.18■□□□□ 0.02
CPA3P15088 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.18■□□□□ 0.02
CPA3P15088 GPS2P2-201ENST00000430745 888 ntBASIC15.18■□□□□ 0.02
CPA3P15088 SPDYE14P-201ENST00000442619 822 ntBASIC15.18■□□□□ 0.02
CPA3P15088 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.18■□□□□ 0.02
CPA3P15088 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.18■□□□□ 0.02
CPA3P15088 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.18■□□□□ 0.02
CPA3P15088 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CPA3P15088 AC026150.2-201ENST00000564693 1156 ntBASIC15.18■□□□□ 0.02
CPA3P15088 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.18■□□□□ 0.02
CPA3P15088 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.18■□□□□ 0.02
CPA3P15088 AL513210.1-201ENST00000629608 234 ntBASIC15.18■□□□□ 0.02
CPA3P15088 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CPA3P15088 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 AC007787.1-201ENST00000588095 1583 ntBASIC15.18■□□□□ 0.02
CPA3P15088 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPA3P15088 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CPA3P15088 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.18■□□□□ 0.02
CPA3P15088 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.18■□□□□ 0.02
CPA3P15088 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.18■□□□□ 0.02
CPA3P15088 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CPA3P15088 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
CPA3P15088 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.17■□□□□ 0.02
CPA3P15088 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CPA3P15088 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CPA3P15088 AC006504.5-208ENST00000588784 2401 ntBASIC15.17■□□□□ 0.02
CPA3P15088 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.17■□□□□ 0.02
CPA3P15088 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.17■□□□□ 0.02
CPA3P15088 AC005840.4-201ENST00000541242 2494 ntBASIC15.17■□□□□ 0.02
CPA3P15088 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CPA3P15088 AP001267.2-201ENST00000532619 2086 ntBASIC15.17■□□□□ 0.02
CPA3P15088 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 AC138969.3-201ENST00000546612 1459 ntBASIC15.17■□□□□ 0.02
CPA3P15088 AC138932.2-201ENST00000548268 1459 ntBASIC15.17■□□□□ 0.02
CPA3P15088 AC126755.4-201ENST00000549796 1459 ntBASIC15.17■□□□□ 0.02
CPA3P15088 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CPA3P15088 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CPA3P15088 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CPA3P15088 AC004461.1-201ENST00000412461 403 ntBASIC15.17■□□□□ 0.02
CPA3P15088 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.17■□□□□ 0.02
CPA3P15088 KRT18P58-201ENST00000527480 1120 ntBASIC15.17■□□□□ 0.02
CPA3P15088 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.17■□□□□ 0.02
CPA3P15088 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.17■□□□□ 0.02
CPA3P15088 AC005829.1-201ENST00000570002 483 ntBASIC15.17■□□□□ 0.02
CPA3P15088 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
CPA3P15088 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
CPA3P15088 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
CPA3P15088 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPA3P15088 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.17■□□□□ 0.02
CPA3P15088 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms