Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.67■□□□□ 0.74
MS4A1P11836 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.67■□□□□ 0.74
MS4A1P11836 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.67■□□□□ 0.74
MS4A1P11836 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.67■□□□□ 0.74
MS4A1P11836 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
MS4A1P11836 AL391069.4-201ENST00000609583 481 ntBASIC19.67■□□□□ 0.74
MS4A1P11836 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 AC093512.1-201ENST00000617969 520 ntBASIC19.67■□□□□ 0.74
MS4A1P11836 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC19.67■□□□□ 0.74
MS4A1P11836 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.67■□□□□ 0.74
MS4A1P11836 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A1P11836 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MS4A1P11836 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.66■□□□□ 0.74
MS4A1P11836 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
MS4A1P11836 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.66■□□□□ 0.74
MS4A1P11836 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MS4A1P11836 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC19.66■□□□□ 0.74
MS4A1P11836 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MS4A1P11836 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MS4A1P11836 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.66■□□□□ 0.74
MS4A1P11836 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.66■□□□□ 0.74
MS4A1P11836 BASP1P1-201ENST00000430708 665 ntBASIC19.66■□□□□ 0.74
MS4A1P11836 AC004066.1-201ENST00000502488 802 ntBASIC19.66■□□□□ 0.74
MS4A1P11836 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.66■□□□□ 0.74
MS4A1P11836 SAMD11P1-201ENST00000571429 661 ntBASIC19.66■□□□□ 0.74
MS4A1P11836 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.66■□□□□ 0.74
MS4A1P11836 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.66■□□□□ 0.74
MS4A1P11836 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
MS4A1P11836 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 AC005840.4-201ENST00000541242 2494 ntBASIC19.66■□□□□ 0.74
MS4A1P11836 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC19.66■□□□□ 0.74
MS4A1P11836 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.66■□□□□ 0.74
MS4A1P11836 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC19.66■□□□□ 0.74
MS4A1P11836 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
MS4A1P11836 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A1P11836 AP000845.1-201ENST00000581677 2131 ntBASIC19.66■□□□□ 0.74
MS4A1P11836 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MS4A1P11836 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
MS4A1P11836 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.65■□□□□ 0.74
MS4A1P11836 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 MIR600HG-201ENST00000449175 5984 ntBASIC19.65■□□□□ 0.74
MS4A1P11836 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.65■□□□□ 0.74
MS4A1P11836 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.65■□□□□ 0.74
MS4A1P11836 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.65■□□□□ 0.74
MS4A1P11836 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.65■□□□□ 0.74
MS4A1P11836 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.65■□□□□ 0.74
MS4A1P11836 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.65■□□□□ 0.74
MS4A1P11836 RARRES2P5-201ENST00000564013 466 ntBASIC19.65■□□□□ 0.74
MS4A1P11836 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.65■□□□□ 0.74
MS4A1P11836 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.65■□□□□ 0.74
MS4A1P11836 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.65■□□□□ 0.74
MS4A1P11836 AC008738.7-201ENST00000609744 511 ntBASIC19.65■□□□□ 0.74
MS4A1P11836 AC004840.1-201ENST00000636359 365 ntBASIC19.65■□□□□ 0.74
MS4A1P11836 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A1P11836 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms