Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RARBP10826 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 AC132872.4-202ENST00000622924 2756 ntBASIC17.04■□□□□ 0.32
RARBP10826 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RARBP10826 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RARBP10826 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RARBP10826 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RARBP10826 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.04■□□□□ 0.32
RARBP10826 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.04■□□□□ 0.32
RARBP10826 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.04■□□□□ 0.32
RARBP10826 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.04■□□□□ 0.32
RARBP10826 AC253536.4-201ENST00000440539 267 ntBASIC17.04■□□□□ 0.32
RARBP10826 RNMTL1P1-201ENST00000454103 560 ntBASIC17.04■□□□□ 0.32
RARBP10826 NUP210P1-202ENST00000504322 710 ntBASIC17.04■□□□□ 0.32
RARBP10826 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.04■□□□□ 0.32
RARBP10826 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.04■□□□□ 0.32
RARBP10826 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.04■□□□□ 0.32
RARBP10826 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.04■□□□□ 0.32
RARBP10826 RN7SL163P-201ENST00000583100 276 ntBASIC17.04■□□□□ 0.32
RARBP10826 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.04■□□□□ 0.32
RARBP10826 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 AC079336.7-201ENST00000623428 1078 ntBASIC17.04■□□□□ 0.32
RARBP10826 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.04■□□□□ 0.32
RARBP10826 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RARBP10826 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.04■□□□□ 0.32
RARBP10826 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RARBP10826 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RARBP10826 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.03■□□□□ 0.32
RARBP10826 CLUHP2-201ENST00000426660 1303 ntBASIC17.03■□□□□ 0.32
RARBP10826 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.03■□□□□ 0.32
RARBP10826 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RARBP10826 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.03■□□□□ 0.32
RARBP10826 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RARBP10826 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RARBP10826 LDHBP1-201ENST00000455730 1119 ntBASIC17.03■□□□□ 0.32
RARBP10826 TUBB8P8-201ENST00000458717 1058 ntBASIC17.03■□□□□ 0.32
RARBP10826 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.03■□□□□ 0.32
RARBP10826 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.03■□□□□ 0.32
RARBP10826 RN7SL574P-201ENST00000581512 297 ntBASIC17.03■□□□□ 0.32
RARBP10826 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RARBP10826 BNIP3P13-201ENST00000599968 566 ntBASIC17.03■□□□□ 0.32
RARBP10826 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.03■□□□□ 0.32
RARBP10826 AC004923.1-202ENST00000642106 209 ntBASIC17.03■□□□□ 0.32
RARBP10826 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.03■□□□□ 0.32
RARBP10826 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.03■□□□□ 0.32
RARBP10826 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RARBP10826 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.03■□□□□ 0.32
RARBP10826 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RARBP10826 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARBP10826 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARBP10826 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARBP10826 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RARBP10826 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARBP10826 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RARBP10826 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RARBP10826 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RARBP10826 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RARBP10826 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
RARBP10826 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.02■□□□□ 0.32
RARBP10826 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RARBP10826 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
RARBP10826 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARBP10826 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RARBP10826 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.02■□□□□ 0.32
RARBP10826 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms