Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.99□□□□□ -0.49
CD28P10747 PAUPAR-201ENST00000630360 2965 ntBASIC11.99□□□□□ -0.49
CD28P10747 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CD28P10747 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 AL138709.1-201ENST00000614840 1693 ntBASIC11.98□□□□□ -0.49
CD28P10747 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.98□□□□□ -0.49
CD28P10747 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
CD28P10747 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.98□□□□□ -0.49
CD28P10747 AC020907.1-201ENST00000616460 1350 ntBASIC11.98□□□□□ -0.49
CD28P10747 AHCYP2-201ENST00000430630 1300 ntBASIC11.98□□□□□ -0.49
CD28P10747 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 AC006001.1-201ENST00000325130 474 ntBASIC11.98□□□□□ -0.49
CD28P10747 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 MIR1202-201ENST00000408529 83 ntBASIC11.98□□□□□ -0.49
CD28P10747 KLF2P2-201ENST00000416807 1039 ntBASIC11.98□□□□□ -0.49
CD28P10747 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.98□□□□□ -0.49
CD28P10747 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.98□□□□□ -0.49
CD28P10747 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.98□□□□□ -0.49
CD28P10747 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC11.98□□□□□ -0.49
CD28P10747 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CD28P10747 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.98□□□□□ -0.49
CD28P10747 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.98□□□□□ -0.49
CD28P10747 DUX4L45-201ENST00000566406 1057 ntBASIC11.98□□□□□ -0.49
CD28P10747 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC11.98□□□□□ -0.49
CD28P10747 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC11.98□□□□□ -0.49
CD28P10747 AC244093.1-201ENST00000610837 814 ntBASIC11.98□□□□□ -0.49
CD28P10747 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CD28P10747 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CD28P10747 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CD28P10747 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
CD28P10747 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.98□□□□□ -0.49
CD28P10747 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CD28P10747 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
CD28P10747 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD28P10747 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.98□□□□□ -0.49
CD28P10747 AC112504.1-201ENST00000623415 1841 ntBASIC11.97□□□□□ -0.49
CD28P10747 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.97□□□□□ -0.49
CD28P10747 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CD28P10747 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CD28P10747 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms