Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MTHFR-210ENST00000641407 2387 ntBASIC16.08■□□□□ 0.16
RARAP10276 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
RARAP10276 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.08■□□□□ 0.16
RARAP10276 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RARAP10276 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARAP10276 AC041040.2-201ENST00000622926 2899 ntBASIC16.08■□□□□ 0.16
RARAP10276 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
RARAP10276 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARAP10276 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARAP10276 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RARAP10276 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RARAP10276 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RARAP10276 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.07■□□□□ 0.16
RARAP10276 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.07■□□□□ 0.16
RARAP10276 CYMP-203ENST00000474680 1263 ntBASIC16.07■□□□□ 0.16
RARAP10276 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.07■□□□□ 0.16
RARAP10276 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.07■□□□□ 0.16
RARAP10276 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.07■□□□□ 0.16
RARAP10276 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.07■□□□□ 0.16
RARAP10276 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.07■□□□□ 0.16
RARAP10276 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RARAP10276 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
RARAP10276 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RARAP10276 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.06■□□□□ 0.16
RARAP10276 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.06■□□□□ 0.16
RARAP10276 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RARAP10276 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 REXO1L4P-201ENST00000605109 1937 ntBASIC16.06■□□□□ 0.16
RARAP10276 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
RARAP10276 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.06■□□□□ 0.16
RARAP10276 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.06■□□□□ 0.16
RARAP10276 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.06■□□□□ 0.16
RARAP10276 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.06■□□□□ 0.16
RARAP10276 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.06■□□□□ 0.16
RARAP10276 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.06■□□□□ 0.16
RARAP10276 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.06■□□□□ 0.16
RARAP10276 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.06■□□□□ 0.16
RARAP10276 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.06■□□□□ 0.16
RARAP10276 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.06■□□□□ 0.16
RARAP10276 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.06■□□□□ 0.16
RARAP10276 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.06■□□□□ 0.16
RARAP10276 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.06■□□□□ 0.16
RARAP10276 AC018529.2-202ENST00000611482 3087 ntBASIC16.06■□□□□ 0.16
RARAP10276 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RARAP10276 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
RARAP10276 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RARAP10276 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.05■□□□□ 0.16
RARAP10276 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.05■□□□□ 0.16
RARAP10276 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.05■□□□□ 0.16
RARAP10276 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.05■□□□□ 0.16
RARAP10276 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RARAP10276 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.05■□□□□ 0.16
RARAP10276 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RARAP10276 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms