Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.22■□□□□ 0.35
TPM3P06753 AL662844.1-201ENST00000546340 181 ntBASIC17.22■□□□□ 0.35
TPM3P06753 AL135744.1-201ENST00000565098 629 ntBASIC17.22■□□□□ 0.35
TPM3P06753 RN7SL510P-201ENST00000581311 263 ntBASIC17.22■□□□□ 0.35
TPM3P06753 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM3P06753 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM3P06753 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TPM3P06753 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TPM3P06753 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC17.22■□□□□ 0.35
TPM3P06753 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TPM3P06753 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.21■□□□□ 0.35
TPM3P06753 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TPM3P06753 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.21■□□□□ 0.35
TPM3P06753 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
TPM3P06753 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TPM3P06753 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.21■□□□□ 0.35
TPM3P06753 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.21■□□□□ 0.35
TPM3P06753 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.21■□□□□ 0.35
TPM3P06753 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.21■□□□□ 0.35
TPM3P06753 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.21■□□□□ 0.35
TPM3P06753 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TPM3P06753 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TPM3P06753 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TPM3P06753 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TPM3P06753 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.21■□□□□ 0.35
TPM3P06753 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TPM3P06753 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM3P06753 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
TPM3P06753 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
TPM3P06753 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TPM3P06753 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TPM3P06753 PTENP1-202ENST00000532280 3996 ntBASIC17.21■□□□□ 0.34
TPM3P06753 AC018442.1-201ENST00000421439 2061 ntBASIC17.2■□□□□ 0.34
TPM3P06753 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TPM3P06753 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.2■□□□□ 0.34
TPM3P06753 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.2■□□□□ 0.34
TPM3P06753 AL607033.1-201ENST00000623900 1599 ntBASIC17.2■□□□□ 0.34
TPM3P06753 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TPM3P06753 TFAMP1-201ENST00000412727 736 ntBASIC17.2■□□□□ 0.34
TPM3P06753 AL355306.1-201ENST00000415580 579 ntBASIC17.2■□□□□ 0.34
TPM3P06753 AL671277.1-201ENST00000429656 993 ntBASIC17.2■□□□□ 0.34
TPM3P06753 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.2■□□□□ 0.34
TPM3P06753 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.2■□□□□ 0.34
TPM3P06753 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.2■□□□□ 0.34
TPM3P06753 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.2■□□□□ 0.34
TPM3P06753 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.2■□□□□ 0.34
TPM3P06753 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.2■□□□□ 0.34
TPM3P06753 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TPM3P06753 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.2■□□□□ 0.34
TPM3P06753 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.2■□□□□ 0.34
TPM3P06753 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.2■□□□□ 0.34
TPM3P06753 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TPM3P06753 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.2■□□□□ 0.34
TPM3P06753 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms