Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.96□□□□□ -0.17
P04436 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P04436 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.96□□□□□ -0.18
P04436 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
P04436 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
P04436 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
P04436 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
P04436 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
P04436 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
P04436 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
P04436 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.95□□□□□ -0.18
P04436 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.95□□□□□ -0.18
P04436 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
P04436 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
P04436 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
P04436 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
P04436 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.95□□□□□ -0.18
P04436 AC104457.1-201ENST00000401024 814 ntBASIC13.95□□□□□ -0.18
P04436 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.95□□□□□ -0.18
P04436 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.95□□□□□ -0.18
P04436 HLA-V-201ENST00000429037 534 ntBASIC13.95□□□□□ -0.18
P04436 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.95□□□□□ -0.18
P04436 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
P04436 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.95□□□□□ -0.18
P04436 AC119751.2-201ENST00000504529 210 ntBASIC13.95□□□□□ -0.18
P04436 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.95□□□□□ -0.18
P04436 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.95□□□□□ -0.18
P04436 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.95□□□□□ -0.18
P04436 AC138951.2-201ENST00000623455 1161 ntBASIC13.95□□□□□ -0.18
P04436 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.95□□□□□ -0.18
P04436 AL603764.1-201ENST00000636452 321 ntBASIC13.95□□□□□ -0.18
P04436 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.95□□□□□ -0.18
P04436 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
P04436 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
P04436 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.95□□□□□ -0.18
P04436 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.95□□□□□ -0.18
P04436 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
P04436 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.95□□□□□ -0.18
P04436 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.95□□□□□ -0.18
P04436 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.95□□□□□ -0.18
P04436 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
P04436 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.95□□□□□ -0.18
P04436 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.95□□□□□ -0.18
P04436 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
P04436 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
P04436 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.95□□□□□ -0.18
P04436 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04436 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.94□□□□□ -0.18
P04436 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
P04436 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.94□□□□□ -0.18
P04436 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 AC012508.2-201ENST00000567613 1472 ntBASIC13.94□□□□□ -0.18
P04436 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.94□□□□□ -0.18
P04436 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.94□□□□□ -0.18
P04436 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.94□□□□□ -0.18
P04436 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.94□□□□□ -0.18
P04436 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.94□□□□□ -0.18
P04436 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04436 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms