Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.09■□□□□ 0.17
LMNAP02545 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
LMNAP02545 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.09■□□□□ 0.17
LMNAP02545 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LMNAP02545 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.09■□□□□ 0.17
LMNAP02545 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.09■□□□□ 0.17
LMNAP02545 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.09■□□□□ 0.17
LMNAP02545 PCDHA3-202ENST00000532566 4594 ntBASIC16.09■□□□□ 0.17
LMNAP02545 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LMNAP02545 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.08■□□□□ 0.17
LMNAP02545 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.08■□□□□ 0.17
LMNAP02545 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LMNAP02545 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LMNAP02545 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.08■□□□□ 0.17
LMNAP02545 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LMNAP02545 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
LMNAP02545 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LMNAP02545 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.08■□□□□ 0.17
LMNAP02545 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LMNAP02545 CICP24-201ENST00000605464 2705 ntBASIC16.08■□□□□ 0.16
LMNAP02545 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
LMNAP02545 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LMNAP02545 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LMNAP02545 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LMNAP02545 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LMNAP02545 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.08■□□□□ 0.16
LMNAP02545 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LMNAP02545 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
LMNAP02545 HINT2P1-201ENST00000419438 481 ntBASIC16.08■□□□□ 0.16
LMNAP02545 AL355864.2-201ENST00000447420 863 ntBASIC16.08■□□□□ 0.16
LMNAP02545 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
LMNAP02545 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LMNAP02545 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.08■□□□□ 0.16
LMNAP02545 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.08■□□□□ 0.16
LMNAP02545 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.08■□□□□ 0.16
LMNAP02545 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.08■□□□□ 0.16
LMNAP02545 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.08■□□□□ 0.16
LMNAP02545 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.08■□□□□ 0.16
LMNAP02545 AL139011.1-202ENST00000642063 584 ntBASIC16.08■□□□□ 0.16
LMNAP02545 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.08■□□□□ 0.16
LMNAP02545 PRAL-201ENST00000624952 3286 ntBASIC16.08■□□□□ 0.16
LMNAP02545 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.08■□□□□ 0.16
LMNAP02545 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LMNAP02545 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LMNAP02545 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
LMNAP02545 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LMNAP02545 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LMNAP02545 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.08■□□□□ 0.16
LMNAP02545 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LMNAP02545 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LMNAP02545 GGT3P-204ENST00000453783 1664 ntBASIC16.08■□□□□ 0.16
LMNAP02545 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LMNAP02545 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.08■□□□□ 0.16
LMNAP02545 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
LMNAP02545 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LMNAP02545 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.07■□□□□ 0.16
LMNAP02545 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LMNAP02545 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.07■□□□□ 0.16
LMNAP02545 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LMNAP02545 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.07■□□□□ 0.16
LMNAP02545 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LMNAP02545 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 LDHBP1-201ENST00000455730 1119 ntBASIC16.07■□□□□ 0.16
LMNAP02545 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.07■□□□□ 0.16
LMNAP02545 MIR4722-201ENST00000578292 60 ntBASIC16.07■□□□□ 0.16
LMNAP02545 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
LMNAP02545 U62317.3-201ENST00000608319 855 ntBASIC16.07■□□□□ 0.16
LMNAP02545 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.07■□□□□ 0.16
LMNAP02545 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.07■□□□□ 0.16
LMNAP02545 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LMNAP02545 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
LMNAP02545 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.07■□□□□ 0.16
LMNAP02545 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LMNAP02545 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.07■□□□□ 0.16
LMNAP02545 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.07■□□□□ 0.16
LMNAP02545 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms