Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.57□□□□□ -0.56
HLA-DQA1P01909 AC012569.1-201ENST00000591191 1524 ntBASIC11.57□□□□□ -0.56
HLA-DQA1P01909 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 PCDHA5-203ENST00000614258 4248 ntBASIC11.57□□□□□ -0.56
HLA-DQA1P01909 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 BX005266.1-201ENST00000473402 457 ntBASIC11.57□□□□□ -0.56
HLA-DQA1P01909 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 AC064862.7-201ENST00000604520 867 ntBASIC11.57□□□□□ -0.56
HLA-DQA1P01909 AC008608.2-201ENST00000606089 416 ntBASIC11.57□□□□□ -0.56
HLA-DQA1P01909 IFNL4P1-201ENST00000607083 540 ntBASIC11.57□□□□□ -0.56
HLA-DQA1P01909 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HLA-DQA1P01909 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 TMEM198B-204ENST00000484016 896 ntBASIC11.56□□□□□ -0.56
HLA-DQA1P01909 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.56□□□□□ -0.56
HLA-DQA1P01909 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms