Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HCN1O60741 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.39□□□□□ -0.11
HCN1O60741 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.39□□□□□ -0.11
HCN1O60741 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.39□□□□□ -0.11
HCN1O60741 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN1O60741 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN1O60741 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
HCN1O60741 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.38□□□□□ -0.11
HCN1O60741 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HCN1O60741 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HCN1O60741 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.38□□□□□ -0.11
HCN1O60741 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.38□□□□□ -0.11
HCN1O60741 AP006294.1-201ENST00000415407 339 ntBASIC14.38□□□□□ -0.11
HCN1O60741 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.38□□□□□ -0.11
HCN1O60741 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.38□□□□□ -0.11
HCN1O60741 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.38□□□□□ -0.11
HCN1O60741 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 KRT17P7-201ENST00000451704 1104 ntBASIC14.38□□□□□ -0.11
HCN1O60741 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.38□□□□□ -0.11
HCN1O60741 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.38□□□□□ -0.11
HCN1O60741 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.38□□□□□ -0.11
HCN1O60741 AC004790.1-201ENST00000612686 536 ntBASIC14.38□□□□□ -0.11
HCN1O60741 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 LINC00528-201ENST00000600723 2160 ntBASIC14.38□□□□□ -0.11
HCN1O60741 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HCN1O60741 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN1O60741 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.38□□□□□ -0.11
HCN1O60741 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HCN1O60741 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN1O60741 AC138969.3-201ENST00000546612 1459 ntBASIC14.38□□□□□ -0.11
HCN1O60741 AC138932.2-201ENST00000548268 1459 ntBASIC14.38□□□□□ -0.11
HCN1O60741 AC126755.4-201ENST00000549796 1459 ntBASIC14.38□□□□□ -0.11
HCN1O60741 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HCN1O60741 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HCN1O60741 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
HCN1O60741 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 AZGP1P1-201ENST00000411909 902 ntBASIC14.37□□□□□ -0.11
HCN1O60741 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.37□□□□□ -0.11
HCN1O60741 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.37□□□□□ -0.11
HCN1O60741 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 PHKG1P2-201ENST00000457537 863 ntBASIC14.37□□□□□ -0.11
HCN1O60741 AC011495.1-201ENST00000498085 584 ntBASIC14.37□□□□□ -0.11
HCN1O60741 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms