Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 AC026434.2-201ENST00000506094 1078 ntBASIC13.72□□□□□ -0.21
ZIC3O60481 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.72□□□□□ -0.21
ZIC3O60481 ENPP7P14-201ENST00000621765 1040 ntBASIC13.72□□□□□ -0.21
ZIC3O60481 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ZIC3O60481 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.72□□□□□ -0.21
ZIC3O60481 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.72□□□□□ -0.21
ZIC3O60481 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.72□□□□□ -0.21
ZIC3O60481 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 AC104640.1-201ENST00000562617 2109 ntBASIC13.72□□□□□ -0.21
ZIC3O60481 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.72□□□□□ -0.21
ZIC3O60481 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.72□□□□□ -0.21
ZIC3O60481 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ZIC3O60481 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ZIC3O60481 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZIC3O60481 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ZIC3O60481 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ZIC3O60481 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 AC023157.3-201ENST00000619086 2088 ntBASIC13.71□□□□□ -0.21
ZIC3O60481 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
ZIC3O60481 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.71□□□□□ -0.21
ZIC3O60481 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.71□□□□□ -0.21
ZIC3O60481 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.71□□□□□ -0.21
ZIC3O60481 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
ZIC3O60481 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ZIC3O60481 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.71□□□□□ -0.21
ZIC3O60481 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
ZIC3O60481 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ZIC3O60481 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.71□□□□□ -0.21
ZIC3O60481 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
ZIC3O60481 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.71□□□□□ -0.21
ZIC3O60481 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.71□□□□□ -0.21
ZIC3O60481 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.71□□□□□ -0.21
ZIC3O60481 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.71□□□□□ -0.21
ZIC3O60481 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.71□□□□□ -0.21
ZIC3O60481 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.71□□□□□ -0.21
ZIC3O60481 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.71□□□□□ -0.21
ZIC3O60481 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.71□□□□□ -0.21
ZIC3O60481 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
ZIC3O60481 AC078819.1-201ENST00000547454 765 ntBASIC13.71□□□□□ -0.21
ZIC3O60481 AC012085.1-201ENST00000548270 765 ntBASIC13.71□□□□□ -0.21
ZIC3O60481 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.71□□□□□ -0.21
ZIC3O60481 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 AC004466.1-201ENST00000599515 1080 ntBASIC13.71□□□□□ -0.21
ZIC3O60481 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ZIC3O60481 AC133552.6-201ENST00000613406 534 ntBASIC13.71□□□□□ -0.21
ZIC3O60481 RHOXF1P1-202ENST00000635473 501 ntBASIC13.71□□□□□ -0.21
ZIC3O60481 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
ZIC3O60481 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.71□□□□□ -0.21
ZIC3O60481 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC3O60481 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZIC3O60481 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZIC3O60481 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZIC3O60481 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.71□□□□□ -0.22
ZIC3O60481 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ZIC3O60481 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
ZIC3O60481 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC3O60481 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC3O60481 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZIC3O60481 ZBED1P1-201ENST00000502364 1930 ntBASIC13.7□□□□□ -0.22
ZIC3O60481 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZIC3O60481 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.7□□□□□ -0.22
ZIC3O60481 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC3O60481 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC3O60481 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC3O60481 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.7□□□□□ -0.22
ZIC3O60481 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
ZIC3O60481 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC3O60481 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC3O60481 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC3O60481 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC3O60481 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC3O60481 TSPY26P-202ENST00000565928 3884 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms