Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.64□□□□□ -0.07
LCMT2O60294 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LCMT2O60294 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.63□□□□□ -0.07
LCMT2O60294 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.63□□□□□ -0.07
LCMT2O60294 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LCMT2O60294 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.63□□□□□ -0.07
LCMT2O60294 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
LCMT2O60294 AC006058.4-201ENST00000624016 1670 ntBASIC14.63□□□□□ -0.07
LCMT2O60294 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 RNU1-114P-201ENST00000365297 166 ntBASIC14.63□□□□□ -0.07
LCMT2O60294 ACKR1-201ENST00000368121 1240 ntBASIC14.63□□□□□ -0.07
LCMT2O60294 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.63□□□□□ -0.07
LCMT2O60294 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.63□□□□□ -0.07
LCMT2O60294 NUS1P3-201ENST00000423502 862 ntBASIC14.63□□□□□ -0.07
LCMT2O60294 ACTG1P3-201ENST00000431775 1114 ntBASIC14.63□□□□□ -0.07
LCMT2O60294 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.63□□□□□ -0.07
LCMT2O60294 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.63□□□□□ -0.07
LCMT2O60294 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.63□□□□□ -0.07
LCMT2O60294 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LCMT2O60294 AC011495.1-201ENST00000498085 584 ntBASIC14.63□□□□□ -0.07
LCMT2O60294 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.63□□□□□ -0.07
LCMT2O60294 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LCMT2O60294 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LCMT2O60294 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.63□□□□□ -0.07
LCMT2O60294 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
LCMT2O60294 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.63□□□□□ -0.07
LCMT2O60294 IGHV3-72-202ENST00000621503 303 ntBASIC14.63□□□□□ -0.07
LCMT2O60294 AL358472.5-202ENST00000641448 1267 ntBASIC14.63□□□□□ -0.07
LCMT2O60294 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.63□□□□□ -0.07
LCMT2O60294 ACE3P-201ENST00000423435 1973 ntBASIC14.63□□□□□ -0.07
LCMT2O60294 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.63□□□□□ -0.07
LCMT2O60294 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LCMT2O60294 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.63□□□□□ -0.07
LCMT2O60294 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
LCMT2O60294 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LCMT2O60294 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.62□□□□□ -0.07
LCMT2O60294 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LCMT2O60294 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
LCMT2O60294 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.62□□□□□ -0.07
LCMT2O60294 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.62□□□□□ -0.07
LCMT2O60294 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
LCMT2O60294 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
LCMT2O60294 AC005225.4-201ENST00000557330 545 ntBASIC14.62□□□□□ -0.07
LCMT2O60294 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.62□□□□□ -0.07
LCMT2O60294 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.62□□□□□ -0.07
LCMT2O60294 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.62□□□□□ -0.07
LCMT2O60294 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.62□□□□□ -0.07
LCMT2O60294 AP005019.2-201ENST00000615104 511 ntBASIC14.62□□□□□ -0.07
LCMT2O60294 CU639417.3-201ENST00000624240 1404 ntBASIC14.62□□□□□ -0.07
LCMT2O60294 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.62□□□□□ -0.07
LCMT2O60294 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.62□□□□□ -0.07
LCMT2O60294 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms