Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.63□□□□□ -0.07
CLOCKO15516 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CLOCKO15516 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.63□□□□□ -0.07
CLOCKO15516 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.63□□□□□ -0.07
CLOCKO15516 AC004461.1-201ENST00000412461 403 ntBASIC14.63□□□□□ -0.07
CLOCKO15516 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.63□□□□□ -0.07
CLOCKO15516 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.63□□□□□ -0.07
CLOCKO15516 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.63□□□□□ -0.07
CLOCKO15516 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.63□□□□□ -0.07
CLOCKO15516 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.63□□□□□ -0.07
CLOCKO15516 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.63□□□□□ -0.07
CLOCKO15516 AC093028.1-201ENST00000622998 982 ntBASIC14.63□□□□□ -0.07
CLOCKO15516 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CLOCKO15516 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CLOCKO15516 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CLOCKO15516 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.63□□□□□ -0.07
CLOCKO15516 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.63□□□□□ -0.07
CLOCKO15516 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CLOCKO15516 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLOCKO15516 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.62□□□□□ -0.07
CLOCKO15516 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.62□□□□□ -0.07
CLOCKO15516 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.62□□□□□ -0.07
CLOCKO15516 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.62□□□□□ -0.07
CLOCKO15516 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CLOCKO15516 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CLOCKO15516 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.62□□□□□ -0.07
CLOCKO15516 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.62□□□□□ -0.07
CLOCKO15516 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLOCKO15516 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.62□□□□□ -0.07
CLOCKO15516 RPL5P21-201ENST00000404620 815 ntBASIC14.62□□□□□ -0.07
CLOCKO15516 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.62□□□□□ -0.07
CLOCKO15516 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.62□□□□□ -0.07
CLOCKO15516 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.62□□□□□ -0.07
CLOCKO15516 PHKG1P2-201ENST00000457537 863 ntBASIC14.62□□□□□ -0.07
CLOCKO15516 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 RFPL4AP1-201ENST00000530883 850 ntBASIC14.62□□□□□ -0.07
CLOCKO15516 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CLOCKO15516 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.62□□□□□ -0.07
CLOCKO15516 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.62□□□□□ -0.07
CLOCKO15516 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CLOCKO15516 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.62□□□□□ -0.07
CLOCKO15516 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 AL513210.1-201ENST00000629608 234 ntBASIC14.62□□□□□ -0.07
CLOCKO15516 AC105339.1-204ENST00000636249 355 ntBASIC14.62□□□□□ -0.07
CLOCKO15516 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CLOCKO15516 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms