Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MCF2LO15068 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MCF2LO15068 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MCF2LO15068 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MCF2LO15068 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MCF2LO15068 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
MCF2LO15068 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.07■□□□□ 0.16
MCF2LO15068 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.06■□□□□ 0.16
MCF2LO15068 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.06■□□□□ 0.16
MCF2LO15068 AC013726.1-201ENST00000563747 2285 ntBASIC16.06■□□□□ 0.16
MCF2LO15068 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.06■□□□□ 0.16
MCF2LO15068 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.06■□□□□ 0.16
MCF2LO15068 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.06■□□□□ 0.16
MCF2LO15068 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.06■□□□□ 0.16
MCF2LO15068 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.06■□□□□ 0.16
MCF2LO15068 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.06■□□□□ 0.16
MCF2LO15068 NME2P1-201ENST00000426182 414 ntBASIC16.06■□□□□ 0.16
MCF2LO15068 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.06■□□□□ 0.16
MCF2LO15068 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.06■□□□□ 0.16
MCF2LO15068 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.06■□□□□ 0.16
MCF2LO15068 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.06■□□□□ 0.16
MCF2LO15068 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.06■□□□□ 0.16
MCF2LO15068 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MCF2LO15068 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.06■□□□□ 0.16
MCF2LO15068 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.06■□□□□ 0.16
MCF2LO15068 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.06■□□□□ 0.16
MCF2LO15068 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MCF2LO15068 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.06■□□□□ 0.16
MCF2LO15068 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MCF2LO15068 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.05■□□□□ 0.16
MCF2LO15068 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.05■□□□□ 0.16
MCF2LO15068 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MCF2LO15068 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.05■□□□□ 0.16
MCF2LO15068 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MCF2LO15068 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.05■□□□□ 0.16
MCF2LO15068 AL133267.1-201ENST00000398220 340 ntBASIC16.05■□□□□ 0.16
MCF2LO15068 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.05■□□□□ 0.16
MCF2LO15068 RPL13P2-201ENST00000440687 659 ntBASIC16.05■□□□□ 0.16
MCF2LO15068 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.05■□□□□ 0.16
MCF2LO15068 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.05■□□□□ 0.16
MCF2LO15068 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.05■□□□□ 0.16
MCF2LO15068 RRP7BP-205ENST00000566851 833 ntBASIC16.05■□□□□ 0.16
MCF2LO15068 LINC01115-203ENST00000606068 577 ntBASIC16.05■□□□□ 0.16
MCF2LO15068 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.05■□□□□ 0.16
MCF2LO15068 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.05■□□□□ 0.16
MCF2LO15068 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 CICP23-201ENST00000605013 2741 ntBASIC16.05■□□□□ 0.16
MCF2LO15068 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MCF2LO15068 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.05■□□□□ 0.16
MCF2LO15068 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.05■□□□□ 0.16
MCF2LO15068 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MCF2LO15068 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MCF2LO15068 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.05■□□□□ 0.16
MCF2LO15068 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.04■□□□□ 0.16
MCF2LO15068 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms