Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 FOS-208ENST00000555686 1496 ntTSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 AC134407.2-201ENST00000625089 1978 ntBASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 CCSER1-209ENST00000509176 5847 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 COX5BP2-201ENST00000392354 334 ntBASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 AC239809.2-201ENST00000415381 517 ntBASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 MFAP1P1-201ENST00000442257 1255 ntBASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 AC008040.2-201ENST00000461049 708 ntBASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 WWOX-216ENST00000569818 525 ntBASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 MIR4674-201ENST00000582457 87 ntBASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 MIR6786-201ENST00000616843 113 ntBASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 ABBA01031674.1-201ENST00000635145 728 ntBASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 AC004241.5-201ENST00000623870 2448 ntBASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 PPP1R26P1-201ENST00000474415 3613 ntBASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 DDX25-201ENST00000263576 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 OS9-218ENST00000551035 2246 ntTSL 2 BASIC8.44□□□□□ -1.06
CHKB-CPT1BH3BT56 BCL2L13-215ENST00000611738 4817 ntTSL 4 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 HSBP1-201ENST00000433866 8784 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 PPIP5K1-203ENST00000360135 5559 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 PPIP5K1-204ENST00000360301 5565 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 PPIP5K1-206ENST00000381885 5596 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 TP73-209ENST00000603362 1668 ntTSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC8.43□□□□□ -1.06
CHKB-CPT1BH3BT56 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms