Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VGLL3A8MV65 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
VGLL3A8MV65 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
VGLL3A8MV65 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VGLL3A8MV65 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VGLL3A8MV65 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.05■□□□□ -0
VGLL3A8MV65 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VGLL3A8MV65 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.04■□□□□ -0
VGLL3A8MV65 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
VGLL3A8MV65 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC15.04■□□□□ -0
VGLL3A8MV65 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.04■□□□□ -0
VGLL3A8MV65 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.04■□□□□ -0
VGLL3A8MV65 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
VGLL3A8MV65 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.04■□□□□ -0
VGLL3A8MV65 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
VGLL3A8MV65 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
VGLL3A8MV65 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 KRT8P44-201ENST00000441609 1350 ntBASIC15.04■□□□□ -0
VGLL3A8MV65 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
VGLL3A8MV65 AC022898.2-201ENST00000616822 1312 ntBASIC15.04■□□□□ -0
VGLL3A8MV65 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
VGLL3A8MV65 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.04■□□□□ -0
VGLL3A8MV65 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.04■□□□□ -0
VGLL3A8MV65 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.04■□□□□ -0
VGLL3A8MV65 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.04■□□□□ -0
VGLL3A8MV65 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.04■□□□□ -0
VGLL3A8MV65 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.04■□□□□ -0
VGLL3A8MV65 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.04■□□□□ -0
VGLL3A8MV65 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.04■□□□□ -0
VGLL3A8MV65 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
VGLL3A8MV65 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC15.04■□□□□ -0
VGLL3A8MV65 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VGLL3A8MV65 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VGLL3A8MV65 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC15.04■□□□□ -0
VGLL3A8MV65 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.04■□□□□ -0
VGLL3A8MV65 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.04■□□□□ -0
VGLL3A8MV65 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.04■□□□□ -0
VGLL3A8MV65 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
VGLL3A8MV65 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 HOXB1-202ENST00000577092 1414 ntBASIC15.03■□□□□ -0
VGLL3A8MV65 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.03■□□□□ -0
VGLL3A8MV65 STARP1-201ENST00000397973 869 ntBASIC15.03■□□□□ -0
VGLL3A8MV65 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.03■□□□□ -0
VGLL3A8MV65 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.03■□□□□ -0
VGLL3A8MV65 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.03■□□□□ -0
VGLL3A8MV65 NTF6B-201ENST00000591913 560 ntBASIC15.03■□□□□ -0
VGLL3A8MV65 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
VGLL3A8MV65 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
VGLL3A8MV65 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC15.03■□□□□ -0
VGLL3A8MV65 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.03■□□□□ -0
VGLL3A8MV65 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
VGLL3A8MV65 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VGLL3A8MV65 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms