Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 AC006538.3-201ENST00000612495 578 ntBASIC12.34□□□□□ -0.43
SRRM4A7MD48 AC004790.1-201ENST00000612686 536 ntBASIC12.34□□□□□ -0.43
SRRM4A7MD48 AC106028.4-201ENST00000614509 607 ntBASIC12.34□□□□□ -0.43
SRRM4A7MD48 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 AC140479.7-201ENST00000636301 2332 ntBASIC12.34□□□□□ -0.43
SRRM4A7MD48 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 AC139749.1-202ENST00000617529 3139 ntBASIC12.34□□□□□ -0.43
SRRM4A7MD48 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 PCDHA3-202ENST00000532566 4594 ntBASIC12.34□□□□□ -0.43
SRRM4A7MD48 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRRM4A7MD48 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SRRM4A7MD48 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.33□□□□□ -0.43
SRRM4A7MD48 AC005912.2-201ENST00000619492 2400 ntBASIC12.33□□□□□ -0.43
SRRM4A7MD48 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SRRM4A7MD48 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
SRRM4A7MD48 AC026748.1-201ENST00000624349 3251 ntBASIC12.33□□□□□ -0.44
SRRM4A7MD48 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 MTHFR-210ENST00000641407 2387 ntBASIC12.33□□□□□ -0.44
SRRM4A7MD48 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRRM4A7MD48 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.33□□□□□ -0.44
SRRM4A7MD48 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms