Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RGPD3A6NKT7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
RGPD3A6NKT7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
RGPD3A6NKT7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.64■□□□□ 0.58
RGPD3A6NKT7 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.64■□□□□ 0.58
RGPD3A6NKT7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
RGPD3A6NKT7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 CTBP2P6-201ENST00000526402 1229 ntBASIC18.64■□□□□ 0.57
RGPD3A6NKT7 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 AC026471.1-201ENST00000564629 3026 ntBASIC18.64■□□□□ 0.57
RGPD3A6NKT7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RGPD3A6NKT7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 EEF1DP5-201ENST00000431410 772 ntBASIC18.63■□□□□ 0.57
RGPD3A6NKT7 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 EMC4-208ENST00000559078 599 ntTSL 3 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 AC023968.2-201ENST00000560593 1049 ntBASIC18.63■□□□□ 0.57
RGPD3A6NKT7 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC18.63■□□□□ 0.57
RGPD3A6NKT7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 WASH7P-201ENST00000488147 1351 ntBASIC18.63■□□□□ 0.57
RGPD3A6NKT7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 BCRP4-201ENST00000506079 804 ntBASIC18.63■□□□□ 0.57
RGPD3A6NKT7 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 AC124068.2-201ENST00000569473 1109 ntBASIC18.63■□□□□ 0.57
RGPD3A6NKT7 FBXO36P1-201ENST00000579006 471 ntBASIC18.63■□□□□ 0.57
RGPD3A6NKT7 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.63■□□□□ 0.57
RGPD3A6NKT7 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 AC009093.10-201ENST00000641956 1442 ntBASIC18.62■□□□□ 0.57
RGPD3A6NKT7 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 PFN2-212ENST00000490975 858 ntTSL 4 BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 AC142086.5-202ENST00000562500 217 ntBASIC18.62■□□□□ 0.57
RGPD3A6NKT7 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 RARS-210ENST00000626454 177 ntTSL 5 BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 LILRP1-201ENST00000444199 1370 ntBASIC18.62■□□□□ 0.57
RGPD3A6NKT7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RGPD3A6NKT7 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms