Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 AC023141.5-201ENST00000458585 616 ntBASIC16.27■□□□□ 0.2
RCCD1A6NED2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 AL109936.8-201ENST00000641772 604 ntBASIC16.27■□□□□ 0.2
RCCD1A6NED2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RCCD1A6NED2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RCCD1A6NED2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RCCD1A6NED2 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RCCD1A6NED2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RCCD1A6NED2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RCCD1A6NED2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RCCD1A6NED2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
RCCD1A6NED2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 TEX28P1-201ENST00000613479 1221 ntBASIC16.26■□□□□ 0.19
RCCD1A6NED2 TEX28P2-201ENST00000617764 1221 ntBASIC16.26■□□□□ 0.19
RCCD1A6NED2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RCCD1A6NED2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.26■□□□□ 0.19
RCCD1A6NED2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.25■□□□□ 0.19
RCCD1A6NED2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms