Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTCH2Q9Y6C5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCH2Q9Y6C5 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTCH2Q9Y6C5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCH2Q9Y6C5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCH2Q9Y6C5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.03■□□□□ 0.32
PTCH2Q9Y6C5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCH2Q9Y6C5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTCH2Q9Y6C5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 AL596087.1-201ENST00000400979 1969 ntBASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 AC092364.2-201ENST00000596710 2692 ntBASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 AP003392.6-201ENST00000607709 325 ntBASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 AC073911.3-201ENST00000624401 631 ntBASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCH2Q9Y6C5 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTCH2Q9Y6C5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
PTCH2Q9Y6C5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTCH2Q9Y6C5 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.02■□□□□ 0.31
PTCH2Q9Y6C5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTCH2Q9Y6C5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTCH2Q9Y6C5 AL118508.1-201ENST00000613502 2345 ntBASIC17.02■□□□□ 0.31
PTCH2Q9Y6C5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 AC136759.1-202ENST00000530858 2194 ntBASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 AC078875.1-201ENST00000431907 724 ntBASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 AP003398.1-201ENST00000531124 318 ntBASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 AC005962.1-201ENST00000584100 773 ntBASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 MIR6769A-201ENST00000617340 73 ntBASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 AC105137.3-201ENST00000617588 984 ntBASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 AC006449.5-201ENST00000610658 2098 ntBASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.01■□□□□ 0.31
PTCH2Q9Y6C5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 REXO1L5P-201ENST00000622260 2098 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms