Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGA9Q9Y5G4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 Z93015.1-201ENST00000451718 390 ntBASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 C2orf69P2-201ENST00000562032 1123 ntBASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AC132938.4-201ENST00000623835 848 ntBASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PCDHGA9Q9Y5G4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 AP001582.1-201ENST00000525856 295 ntBASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 AP001258.2-201ENST00000529891 490 ntBASIC14.34□□□□□ -0.11
PCDHGA9Q9Y5G4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms