Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.43□□□□□ -0.1
IFT52Q9Y366 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.43□□□□□ -0.1
IFT52Q9Y366 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.43□□□□□ -0.1
IFT52Q9Y366 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.43□□□□□ -0.1
IFT52Q9Y366 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
IFT52Q9Y366 LINC00628-201ENST00000628516 1289 ntBASIC14.43□□□□□ -0.1
IFT52Q9Y366 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.43□□□□□ -0.1
IFT52Q9Y366 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.43□□□□□ -0.1
IFT52Q9Y366 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IFT52Q9Y366 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.43□□□□□ -0.1
IFT52Q9Y366 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.43□□□□□ -0.1
IFT52Q9Y366 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
IFT52Q9Y366 AL356585.2-201ENST00000625078 2396 ntBASIC14.42□□□□□ -0.1
IFT52Q9Y366 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 AC097376.2-205ENST00000610159 5334 ntBASIC14.42□□□□□ -0.1
IFT52Q9Y366 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 AL133267.1-201ENST00000398220 340 ntBASIC14.42□□□□□ -0.1
IFT52Q9Y366 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 HLA-V-204ENST00000476601 1289 ntBASIC14.42□□□□□ -0.1
IFT52Q9Y366 HLA-J-203ENST00000494367 1087 ntBASIC14.42□□□□□ -0.1
IFT52Q9Y366 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 AC015910.1-201ENST00000579400 975 ntBASIC14.42□□□□□ -0.1
IFT52Q9Y366 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.42□□□□□ -0.1
IFT52Q9Y366 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
IFT52Q9Y366 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFT52Q9Y366 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IFT52Q9Y366 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFT52Q9Y366 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.41□□□□□ -0.1
IFT52Q9Y366 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.41□□□□□ -0.1
IFT52Q9Y366 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IFT52Q9Y366 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.41□□□□□ -0.1
IFT52Q9Y366 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.41□□□□□ -0.1
IFT52Q9Y366 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.41□□□□□ -0.1
IFT52Q9Y366 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFT52Q9Y366 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFT52Q9Y366 ZBED1P1-201ENST00000502364 1930 ntBASIC14.41□□□□□ -0.1
IFT52Q9Y366 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IFT52Q9Y366 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFT52Q9Y366 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFT52Q9Y366 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
IFT52Q9Y366 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.41□□□□□ -0.1
IFT52Q9Y366 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFT52Q9Y366 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.41□□□□□ -0.1
IFT52Q9Y366 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFT52Q9Y366 AC004967.1-201ENST00000453589 447 ntBASIC14.41□□□□□ -0.1
IFT52Q9Y366 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.41□□□□□ -0.1
IFT52Q9Y366 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
IFT52Q9Y366 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
IFT52Q9Y366 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.41□□□□□ -0.1
IFT52Q9Y366 AC025048.3-201ENST00000590609 569 ntBASIC14.41□□□□□ -0.1
IFT52Q9Y366 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.41□□□□□ -0.1
IFT52Q9Y366 AC005702.4-201ENST00000618393 416 ntBASIC14.41□□□□□ -0.1
IFT52Q9Y366 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms