Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HHLA3Q9XRX5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 TSEN15P1-201ENST00000423257 515 ntBASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 MTND6P24-201ENST00000440466 518 ntBASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 HLA-J-203ENST00000494367 1087 ntBASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 AL512356.2-201ENST00000546955 174 ntBASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 RN7SL828P-201ENST00000607615 303 ntBASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 AC007967.4-201ENST00000614700 386 ntBASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 COL6A4P2-202ENST00000504443 2753 ntBASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HHLA3Q9XRX5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.27□□□□□ -0.6
HHLA3Q9XRX5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
HHLA3Q9XRX5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
HHLA3Q9XRX5 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.27□□□□□ -0.6
HHLA3Q9XRX5 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
HHLA3Q9XRX5 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.27□□□□□ -0.6
HHLA3Q9XRX5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.27□□□□□ -0.6
HHLA3Q9XRX5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HHLA3Q9XRX5 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HHLA3Q9XRX5 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HHLA3Q9XRX5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.27□□□□□ -0.6
HHLA3Q9XRX5 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 PHKG1P2-201ENST00000457537 863 ntBASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 AC069262.1-201ENST00000539058 672 ntBASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 AL450472.2-201ENST00000603663 1156 ntBASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HHLA3Q9XRX5 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms