Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 AC015656.1-201ENST00000624209 3578 ntBASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 AC241585.1-201ENST00000433527 519 ntBASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 FAM86GP-201ENST00000448322 971 ntBASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 AC004066.1-201ENST00000502488 802 ntBASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 AC004840.1-201ENST00000636359 365 ntBASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA7Q9UN72 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 SRD5A3P1-201ENST00000603021 949 ntBASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 BTBD7P1-201ENST00000447253 1453 ntBASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHA7Q9UN72 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHA7Q9UN72 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms