Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS4AQ9UN37 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS4AQ9UN37 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS4AQ9UN37 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS4AQ9UN37 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS4AQ9UN37 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS4AQ9UN37 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VPS4AQ9UN37 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VPS4AQ9UN37 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VPS4AQ9UN37 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS4AQ9UN37 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AC079776.1-201ENST00000401540 1152 ntBASIC14.92□□□□□ -0.02
VPS4AQ9UN37 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AC234783.1-201ENST00000441761 496 ntBASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AC022210.1-201ENST00000449856 793 ntBASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 FAM8A2P-201ENST00000528813 1142 ntBASIC14.92□□□□□ -0.02
VPS4AQ9UN37 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 RN7SL828P-201ENST00000607615 303 ntBASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AL844908.2-201ENST00000609461 460 ntBASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AC004840.1-201ENST00000636359 365 ntBASIC14.92□□□□□ -0.02
VPS4AQ9UN37 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AC148477.4-201ENST00000613430 1793 ntBASIC14.92□□□□□ -0.02
VPS4AQ9UN37 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS4AQ9UN37 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 SPDYE19P-201ENST00000338590 713 ntBASIC14.91□□□□□ -0.02
VPS4AQ9UN37 RPL37AP1-201ENST00000412502 279 ntBASIC14.91□□□□□ -0.02
VPS4AQ9UN37 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 DOC2GP-202ENST00000514950 1163 ntBASIC14.91□□□□□ -0.02
VPS4AQ9UN37 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 HNRNPUP1-201ENST00000554987 333 ntBASIC14.91□□□□□ -0.02
VPS4AQ9UN37 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS4AQ9UN37 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.9□□□□□ -0.02
VPS4AQ9UN37 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms