Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 GHSR-202ENST00000427970 912 ntBASIC17.53■□□□□ 0.4
PNMA3Q9UL41 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 AC134698.3-201ENST00000523880 214 ntBASIC17.53■□□□□ 0.4
PNMA3Q9UL41 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 MIR3907-201ENST00000579424 151 ntBASIC17.53■□□□□ 0.4
PNMA3Q9UL41 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 AC008132.1-202ENST00000342005 1389 ntBASIC17.53■□□□□ 0.4
PNMA3Q9UL41 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PNMA3Q9UL41 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 AC068418.2-201ENST00000577309 3703 ntBASIC17.52■□□□□ 0.4
PNMA3Q9UL41 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 AC007274.2-201ENST00000421675 662 ntBASIC17.52■□□□□ 0.4
PNMA3Q9UL41 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 AL161670.2-201ENST00000557650 1227 ntBASIC17.52■□□□□ 0.4
PNMA3Q9UL41 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 AC004923.1-202ENST00000642106 209 ntBASIC17.52■□□□□ 0.4
PNMA3Q9UL41 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PNMA3Q9UL41 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
PNMA3Q9UL41 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.52■□□□□ 0.39
PNMA3Q9UL41 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.52■□□□□ 0.39
PNMA3Q9UL41 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PNMA3Q9UL41 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.52■□□□□ 0.39
PNMA3Q9UL41 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PNMA3Q9UL41 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.52■□□□□ 0.39
PNMA3Q9UL41 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PNMA3Q9UL41 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PNMA3Q9UL41 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PNMA3Q9UL41 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PNMA3Q9UL41 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PNMA3Q9UL41 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 RNMTL1P1-201ENST00000454103 560 ntBASIC17.51■□□□□ 0.39
PNMA3Q9UL41 NUP210P1-202ENST00000504322 710 ntBASIC17.51■□□□□ 0.39
PNMA3Q9UL41 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 DUX4L47-201ENST00000566374 394 ntBASIC17.51■□□□□ 0.39
PNMA3Q9UL41 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.51■□□□□ 0.39
PNMA3Q9UL41 SPCS2P2-201ENST00000603270 608 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms