Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 AL133267.1-201ENST00000398220 340 ntBASIC13.01□□□□□ -0.33
CLN8Q9UBY8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 TMEM261P1-201ENST00000604899 340 ntBASIC13.01□□□□□ -0.33
CLN8Q9UBY8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 AC063926.2-201ENST00000623766 1308 ntBASIC13.01□□□□□ -0.33
CLN8Q9UBY8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.01□□□□□ -0.33
CLN8Q9UBY8 AL121723.1-201ENST00000445194 1519 ntBASIC13.01□□□□□ -0.33
CLN8Q9UBY8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLN8Q9UBY8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLN8Q9UBY8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
CLN8Q9UBY8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13□□□□□ -0.33
CLN8Q9UBY8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13□□□□□ -0.33
CLN8Q9UBY8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLN8Q9UBY8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLN8Q9UBY8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLN8Q9UBY8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13□□□□□ -0.33
CLN8Q9UBY8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13□□□□□ -0.33
CLN8Q9UBY8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13□□□□□ -0.33
CLN8Q9UBY8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLN8Q9UBY8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLN8Q9UBY8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 NME2-201ENST00000393183 568 ntTSL 2 BASIC13□□□□□ -0.33
CLN8Q9UBY8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13□□□□□ -0.33
CLN8Q9UBY8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13□□□□□ -0.33
CLN8Q9UBY8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13□□□□□ -0.33
CLN8Q9UBY8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13□□□□□ -0.33
CLN8Q9UBY8 WASH4P-201ENST00000564273 1246 ntBASIC13□□□□□ -0.33
CLN8Q9UBY8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13□□□□□ -0.33
CLN8Q9UBY8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 AL035252.4-201ENST00000624174 288 ntBASIC13□□□□□ -0.33
CLN8Q9UBY8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13□□□□□ -0.33
CLN8Q9UBY8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLN8Q9UBY8 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13□□□□□ -0.33
CLN8Q9UBY8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13□□□□□ -0.33
CLN8Q9UBY8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLN8Q9UBY8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms