Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTN3Q9P232 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTN3Q9P232 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTN3Q9P232 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CNTN3Q9P232 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.39■□□□□ 0.21
CNTN3Q9P232 MIR1202-201ENST00000408529 83 ntBASIC16.39■□□□□ 0.21
CNTN3Q9P232 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.39■□□□□ 0.21
CNTN3Q9P232 AL355994.2-201ENST00000447882 704 ntBASIC16.39■□□□□ 0.21
CNTN3Q9P232 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.39■□□□□ 0.21
CNTN3Q9P232 AC026434.2-201ENST00000506094 1078 ntBASIC16.39■□□□□ 0.21
CNTN3Q9P232 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTN3Q9P232 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.39■□□□□ 0.21
CNTN3Q9P232 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTN3Q9P232 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTN3Q9P232 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTN3Q9P232 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CNTN3Q9P232 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CNTN3Q9P232 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTN3Q9P232 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTN3Q9P232 AL137783.1-201ENST00000623494 1896 ntBASIC16.39■□□□□ 0.21
CNTN3Q9P232 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTN3Q9P232 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.39■□□□□ 0.21
CNTN3Q9P232 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CNTN3Q9P232 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.39■□□□□ 0.21
CNTN3Q9P232 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.39■□□□□ 0.21
CNTN3Q9P232 REXO1L6P-201ENST00000603433 1515 ntBASIC16.39■□□□□ 0.21
CNTN3Q9P232 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTN3Q9P232 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.39■□□□□ 0.21
CNTN3Q9P232 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTN3Q9P232 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTN3Q9P232 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTN3Q9P232 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTN3Q9P232 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTN3Q9P232 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTN3Q9P232 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 AC010328.2-201ENST00000597698 1111 ntBASIC16.38■□□□□ 0.21
CNTN3Q9P232 AC004466.1-201ENST00000599515 1080 ntBASIC16.38■□□□□ 0.21
CNTN3Q9P232 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTN3Q9P232 AL354989.2-201ENST00000435838 1540 ntBASIC16.38■□□□□ 0.21
CNTN3Q9P232 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTN3Q9P232 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTN3Q9P232 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTN3Q9P232 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTN3Q9P232 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTN3Q9P232 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTN3Q9P232 AC099063.4-201ENST00000641099 1602 ntBASIC16.37■□□□□ 0.21
CNTN3Q9P232 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNTN3Q9P232 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 C2orf69P2-201ENST00000562032 1123 ntBASIC16.37■□□□□ 0.21
CNTN3Q9P232 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.37■□□□□ 0.21
CNTN3Q9P232 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms