Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP39A1Q9NYL5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CYP39A1Q9NYL5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CYP39A1Q9NYL5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP39A1Q9NYL5 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.26■□□□□ 0.35
CYP39A1Q9NYL5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CYP39A1Q9NYL5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.26■□□□□ 0.35
CYP39A1Q9NYL5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.26■□□□□ 0.35
CYP39A1Q9NYL5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CYP39A1Q9NYL5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 AC138028.6-201ENST00000616106 1482 ntBASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 AL137783.1-201ENST00000623494 1896 ntBASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 AL136309.1-201ENST00000403917 691 ntBASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 AC126915.1-201ENST00000522847 1038 ntBASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.25■□□□□ 0.35
CYP39A1Q9NYL5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 BX284668.4-201ENST00000453917 508 ntBASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 AC100850.1-201ENST00000506768 649 ntBASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 SCARNA20.5-201ENST00000516991 142 ntBASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 AC020658.6-201ENST00000623564 1870 ntBASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 AC012508.2-201ENST00000567613 1472 ntBASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CYP39A1Q9NYL5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 FKBP4P6-201ENST00000457486 1332 ntBASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 AP000593.2-201ENST00000542775 1433 ntBASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYP39A1Q9NYL5 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms