Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 MTND6P24-201ENST00000440466 518 ntBASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 AL158211.3-201ENST00000607385 239 ntBASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.8□□□□□ -0.36
LIN7CQ9NUP9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 AZGP1P1-201ENST00000411909 902 ntBASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 HLA-V-204ENST00000476601 1289 ntBASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 BANF1P1-201ENST00000553684 263 ntBASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 AC106028.4-201ENST00000614509 607 ntBASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
LIN7CQ9NUP9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LIN7CQ9NUP9 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms