Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 AC007191.1-201ENST00000623179 2995 ntBASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 AC106760.1-201ENST00000508690 800 ntBASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 DUX4L45-201ENST00000566406 1057 ntBASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 AC244669.2-201ENST00000612320 853 ntBASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 KRT8P37-201ENST00000451609 1420 ntBASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 AL691432.1-201ENST00000596308 1422 ntBASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ARHGEF3Q9NR81 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 LINC01101-201ENST00000622953 1884 ntBASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 TARDBPP1-201ENST00000442013 1203 ntBASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 AC243562.2-201ENST00000561247 970 ntBASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 AP001063.1-201ENST00000568332 529 ntBASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 AL118558.3-201ENST00000607414 1079 ntBASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 AC008687.7-202ENST00000637404 953 ntBASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ARHGEF3Q9NR81 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms