Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 AP005019.2-201ENST00000615104 511 ntBASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 LINC00554-201ENST00000564841 3011 ntBASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 AC012508.2-201ENST00000567613 1472 ntBASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC4Q9HBW1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.18
LRRC4Q9HBW1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRC4Q9HBW1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRC4Q9HBW1 MST1L-201ENST00000442552 2185 ntBASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 KRT18P25-201ENST00000508931 1278 ntBASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 AC068587.3-201ENST00000526613 355 ntBASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC4Q9HBW1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC4Q9HBW1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms